Escherichia coli K-12 W3110: JW1438
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Entry
JW1438 CDS
T00068
Symbol
ydcV
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW1438 (ydcV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1438 (ydcV)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JW1438 (ydcV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BAA15072
UniProt:
P0AFR9
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All DBs
Position
1516476..1517270
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AA seq
264 aa
AA seq
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MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSD
ILDAVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLAL
LTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRY
VVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL
LVMLVTTLPILGAWWLTREGDNGQ
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcactctgaacgcgcaccgtttttcctcaaactggcggcctggggcggcgttgttttc
ctacattttcccatcctgataatcgccgcctatgcgtttaacactgaagatgcggcgttt
agttttccaccgcagggcctgacgctgcgctggtttagcgtggcagcacagcgtagtgat
attcttgatgccgtgacactgtcacttaaagtggcggcgctggcgacattaattgcgctg
gtgttagggacgctggcagctgccgcgctgtggcgacgagactttttcggcaaaaacgcc
atttcgctgttactgctgctgcccattgcgctgccgggcattgtcactggtctggcgtta
ttaaccgcctttaaaaccatcaatctggagccgggatttttcaccatcgtggtcggtcat
gcgactttttgtgtagttgtggtgtttaacaatgtcatcgcccgttttcgccgcacctcc
tggagtctggttgaggcgtcaatggatcttggggccaatggctggcaaaccttccgctac
gtagtgttgccgaatctcagttcggcgttactggcaggaggaatgctggcgtttgccttg
tcgttcgatgaaatcatcgttacgacctttacggcaggtcatgaacgaacgttaccgttg
tggttgctcaatcagcttgggcgaccgcgtgatgtaccggtaactaacgtggtggcactg
ctggttatgttggtaacaaccttgccgatcctgggggcctggtggctaacccgcgaaggc
gacaatggtcaataa
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