Escherichia coli K-12 W3110: JW1738
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Entry
JW1738 CDS
T00068
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JW1738 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecj03400
]
JW1738 (xthA)
Enzymes [BR:
ecj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JW1738 (xthA)
DNA repair and recombination proteins [BR:
ecj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JW1738 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
BAA15540
UniProt:
P09030
Structure
PDB
PDBj
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All DBs
Position
1834142..1834948
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AA seq
268 aa
AA seq
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MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI
KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC
CVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcaccagcttgaagcc
atcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaagttcatgacgat
atgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttatcacgggcagaaa
ggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtgcgtcgcggcttt
cccggtgacgacgaagaggcgcagcggcggattattatggcggaaatcccctcactgctg
ggtaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgcgaccatccgata
aaattcccggcaaaagcgcagttttatcagaatctgcaaaactacctggaaaccgaactc
aaacgtgataatccggtactgattatgggcgatatgaatatcagccctacagatctggat
atcggcattggcgaagaaaaccgtaagcgctggctgcgtaccggtaaatgctctttcctg
ccggaagagcgcgaatggatggacaggctgatgagctgggggttggtcgataccttccgc
catgcgaatccgcaaacagcagatcgtttctcatggtttgattaccgctcaaaaggtttt
gacgataaccgtggtctgcgcatcgacctgctgctcgccagccaaccgctggcagaatgt
tgcgtagaaaccggcatcgactatgaaatccgcagcatggaaaaaccgtccgatcacgcc
cccgtctgggcgaccttccgccgctaa
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