Escherichia coli K-12 W3110: JW1889
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Entry
JW1889 CDS
T00068
Symbol
araF
Name
(GenBank) L-arabinose transporter subunit
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JW1889 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1889 (araF)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
JW1889 (araF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
DUF1651
DUF5421
Motif
Other DBs
NCBI-ProteinID:
BAA15721
UniProt:
P02924
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1987276..1988265)
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AA seq
329 aa
AA seq
DB search
MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK
IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG
KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMD
ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE
GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEP
PKFTEVTDVVLITRDNFKEELEKKGLGGK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaatttactaaagccctggcagccattggtctggcagccgttatgtcacaatcc
gctatggcggagaacctgaagctcggttttctggtgaagcaaccggaagagccgtggttc
cagaccgaatggaagtttgccgataaagccgggaaggatttagggtttgaggttattaag
attgccgtgccggatggcgaaaaaacattgaacgcgatcgacagcctggctgccagtggc
gcaaaaggtttcgttatttgtactccggaccccaaactcggctctgccatcgtcgcgaaa
gcgcgtggctacgatatgaaagtcattgccgtggatgaccagtttgttaacgccaaaggt
aagccaatggataccgttccgctggtgatgatggcggcgactaaaattggcgaacgtcag
ggccaggaactgtataaagagatgcagaaacgtggctgggatgtcaaagaaagcgcggtg
atggcgattaccgccaacgaactggataccgcccgccgccgtactacgggatctatggat
gcgctgaaagcggccggattcccggaaaaacaaatttatcaggtacctaccaaatctaac
gacatcccgggggcatttgacgctgccaactcaatgctggttcaacatccggaagttaaa
cattggctgatcgtcggtatgaacgacagcaccgtgctgggcggcgtacgcgcgacggaa
ggtcagggctttaaagcggccgatatcatcggcattggcattaacggtgtggatgcggtg
agcgaactgtctaaagcacaggcaaccggcttctacggttccctgctgccaagcccggac
gtacatggctataaatccagcgaaatgctttacaactgggtagcaaaagacgttgaaccg
ccaaaatttaccgaagttaccgacgtggtactgatcacgcgtgacaactttaaagaagaa
ctggagaaaaaaggtttaggcggtaagtaa
DBGET
integrated database retrieval system
