Escherichia coli K-12 W3110: JW1907
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Entry
JW1907 CDS
T00068
Symbol
fliA
Name
(GenBank) RNA polymerase, sigma 28 (sigma F) factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02020
Two-component system
ecj02026
Biofilm formation - Escherichia coli
ecj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW1907 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JW1907 (fliA)
09142 Cell motility
02040 Flagellar assembly
JW1907 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecj03021
]
JW1907 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecj02035
]
JW1907 (fliA)
Transcription machinery [BR:
ecj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JW1907 (fliA)
Bacterial motility proteins [BR:
ecj02035
]
Flagellar system
Flagellar assembly proteins
Stator
JW1907 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
UPF0122
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
BAA15742
UniProt:
P0AEM6
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2003207..2003926)
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AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactactggacagtaatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactgggtaagttataa
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