Escherichia coli K-12 W3110: JW1935
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Entry
JW1935 CDS
T00068
Symbol
rcsA
Name
(GenBank) DNA-binding transcriptional co-regulator with RcsB
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02020
Two-component system
ecj02024
Quorum sensing
ecj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW1935 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW1935 (rcsA)
02026 Biofilm formation - Escherichia coli
JW1935 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW1935 (rcsA)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
JW1935 (rcsA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
BAA15776
UniProt:
P0DMC9
LinkDB
All DBs
Position
2026105..2026728
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AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH
DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgtagttacacccgactaggtttaaccgggtatctg
ttgagtagaggggttaaaaaaagagaaatcaacgacattgaaaccgttgatgaccttgcc
atagcttgtgattcacagcgcccttcagtggtgtttattaatgaggactgtttcatccac
gatgcttctaacagtcagcgtatcaagctcatcattaatcaacatcccaatacgttattt
atcgtttttatggcaattgccaatgttcattttgatgaatatctattggtcagaaaaaat
ttattgatcagttctaaatcgattaaaccggaatctctcgacgatatccttggcgatatt
ctgaaaaaagagacaacgataacctcgtttttaaatatgccgacgttatcattgagccga
accgaatcgagtatgttgcgaatgtggatggcaggtcagggaaccattcaaatctctgac
caaatgaatatcaaagccaagaccgtttcatcgcataaaggtaatattaaacgtaagatc
aaaacgcataataaacaggttatctaccatgtcgtccgactgacggataatgtgactaat
ggtatttttgtcaacatgcgctaa
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