Escherichia coli K-12 W3110: JW1982
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Entry
JW1982 CDS
T00068
Symbol
flu
Name
(GenBank) antigen 43 (Ag43) phase-variable biofilm formation autotransporter
KO
K12687
antigen 43
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JW1982 (flu)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1982 (flu)
02044 Secretion system [BR:
ecj02044
]
JW1982 (flu)
Transporters [BR:
ecj02000
]
Other transporters
Pores ion channels [TC:
1
]
JW1982 (flu)
Secretion system [BR:
ecj02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
JW1982 (flu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIDA
Autotransporter
AC_1
ESPR
fn3_5
Motif
Other DBs
NCBI-ProteinID:
BAA15825
UniProt:
P39180
LinkDB
All DBs
Position
2073676..2076795
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AA seq
1039 aa
AA seq
DB search
MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPG
ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL
QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG
TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD
QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ
VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA
DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ
PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHS
VSGSSAEGYNGQATLNVTF
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacatctgaatacctgctacaggctggtatggaatcacatgacgggcgctttc
gtggttgcctccgaactggcccgcgcacggggtaaacgtggcggtgtggcggttgcactg
tctcttgccgcagtcacgtcactcccggtgctggctgctgacatcgttgtgcacccggga
gaaaccgtgaacggcggaacactggcaaatcatgacaaccagattgtcttcggtacgacc
aacggaatgaccatcagtaccgggctggagtatgggccggataacgaggccaataccggc
gggcaatgggtacaggatggcggaacagccaacaaaacgactgtcaccagtggtggtctt
cagagagtgaaccccggtggaagtgtctcagacacggttatcagtgccggaggcggacag
agccttcagggacgggctgtgaacaccacgctgaatggtggcgaacagtggatgcatgag
ggggcgatagccacaggaaccgtcattaatgataagggctggcaggtcgtcaagcccggt
acagtggcaacggataccgttgttaataccggggcggaagggggaccggatgcagaaaac
ggtgataccgggcagtttgttcgcggggatgccgtacgcacaaccatcaataaaaacggt
cgccagattgtgagagctgaaggaacggcaaataccactgtggtttatgccggcggcgac
cagactgtacatggtcacgcactggataccacgctgaatgggggataccagtatgtgcac
aacggcggtacagcgtctgacactgttgtgaacagtgacggctggcagattgtcaaaaac
gggggtgtggccgggaataccaccgttaatcagaagggcagactgcaggtggacgccggt
ggtacagccacgaatgtcaccctgaagcagggcggcgcactggttaccagtacggctgca
accgttaccggcataaaccgcctgggagcattctctgttgtggagggtaaagctgataat
gtcgtactggaaaatggcggacgcctggatgtgctgaccggacacacagccactaatacc
cgcgtggatgatggcggaacgctggatgtccgcaacggtggcaccgccaccaccgtatcc
atgggaaatggcggtgtactgctggccgattccggtgccgctgtcagtggtacccggagc
gacggaaaggcattcagtatcggaggcggtcaggcggatgccctgatgctggaaaaaggc
agttcattcacgctgaacgccggtgatacggccacggataccacggtaaatggcggactg
ttcaccgccaggggcggcacactggcgggcaccaccacgctgaataacggcgccatactt
accctttccgggaagacggtgaacaacgataccctgaccatccgtgaaggcgatgcactc
ctgcagggaggctctctcaccggtaacggcagcgtggaaaaatcaggaagtggcacactc
actgtcagcaacaccacactcacccagaaagccgtcaacctgaatgaaggcacgctgacg
ctgaacgacagtaccgtcaccacggatgtcattgctcagcgcggtacagccctgaagctg
accggcagcactgtgctgaacggtgccattgaccccacgaatgtcactctcgcctccggt
gccacctggaatatccccgataacgccacggtgcagtcggtggtggatgacctcagccat
gccggacagattcatttcacctccacccgcacagggaagttcgtaccggcaaccctgaaa
gtgaaaaacctgaacggacagaatggcaccatcagcctgcgtgtacgcccggatatggca
cagaacaatgctgacagactggtcattgacggcggcagggcaaccggaaaaaccatcctg
aacctggtgaacgccggcaacagtgcgtcggggctggcgaccagcggtaagggtattcag
gtggtggaagccattaacggtgccaccacggaggaaggggcctttgtccaggggaacagg
ctgcaggccggtgcctttaactactccctcaaccgggacagtgatgagagctggtatctg
cgcagtgaaaatgcttatcgtgcagaagtccccctgtatgcctccatgctgacacaggca
atggactatgaccggattgtggcaggctcccgcagccatcagaccggtgtaaatggtgaa
aacaacagcgtccgtctcagcattcagggcggtcatctcggtcacgataacaatggcggt
attgcccgtggggccacgccggaaagcagcggcagctatggattcgtccgtctggagggt
gacctgatgagaacagaggttgccggtatgtctgtgaccgcgggggtatatggtgctgct
ggccattcttccgttgatgttaaggatgatgacggctcccgtgccggcacggtccgggat
gatgccggcagcctgggcggatacctgaatctggtacacacgtcctccggcctgtgggct
gacattgtggcacagggaacccgccacagcatgaaagcgtcatcggacaataacgacttc
cgcgcccggggctggggctggctgggctcactggaaaccggtctgcccttcagtatcact
gacaacctgatgctggagccacaactgcagtatacctggcagggactttccctggatgac
ggtaaggacaacgccggttatgtgaagttcgggcatggcagtgcacaacatgtgcgtgcc
ggtttccgtctgggcagccacaacgatatgacctttggcgaaggcacctcatcccgtgcc
cccctgcgtgacagtgcaaaacacagtgtgagtgaattaccggtgaactggtgggtacag
ccttctgttatccgcaccttcagctcccggggagatatgcgtgtggggacttccactgca
ggcagcgggatgacgttctctccctcacagaatggcacatcactggacctgcaggccgga
ctggaagcccgtgtccgggaaaatatcaccctgggcgttcaggccggttatgcccacagc
gtcagcggcagcagcgctgaagggtataacggtcaggccacactgaatgtgaccttctga
DBGET
integrated database retrieval system
