Escherichia coli K-12 W3110: JW2538
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Entry
JW2538 CDS
T00068
Symbol
yfhA
Name
(GenBank) predicted DNA-binding response regulator in two-component system
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02020
Two-component system
ecj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW2538 (yfhA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW2538 (yfhA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ecj02022
]
JW2538 (yfhA)
Two-component system [BR:
ecj02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
JW2538 (yfhA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_2
HTH_8
Glycos_transf_1
AAA_16
FAD_binding_2
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAA16462
UniProt:
P0AFU4
LinkDB
All DBs
Position
complement(2686125..2687459)
Genome browser
AA seq
444 aa
AA seq
DB search
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD
EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA
LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA
SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM
PAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI
EQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARM
AGRNRTEFYKLLSRHELDANDFKE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaacctgcgcatttattattggtcgatgacgatccgggattgctgaaactg
cttggcctgcgcctgaccagcgaaggctacagtgtggtcacggcggaaagtggcgctgaa
ggattacgggtactgaatcgcgaaaaagtagatttagtcatcagcgacctgcggatggat
gaaatggacggtatgcagctgtttgctgaaatccagaaagtgcagccgggaatgccggta
attattcttaccgcgcatggttctattcccgatgccgttgctgcaacacagcagggcgtt
tttagtttcctcaccaagcctgtcgacaaagacgcgctatatcaggcaattgacgatgcg
ctggagcaatccgcgccagccaccgatgaacgctggcgcgaggcaattgtcacccgcagc
ccgctgatgctgcgtttgctggaacaggcgcggctggtggcgcaatcagacgtcagcgtt
ttgattaacggtcagagcggcaccgggaaagagattttcgcccaggctatccacaacgcc
agcccgcgcaacagcaaaccatttattgctattaactgtggcgcattgcccgagcaattg
ctggagtcggagctgtttggtcatgcgcgtggcgcgtttactggcgctgtcagcaatcgc
gaaggtttattccaggcggcggaaggcggaacgctatttctcgatgaaattggcgatatg
cctgcgccgttacaggtcaaactgctgcgcgtgttgcaggagcgtaaagtgcgcccgctg
ggcagtaaccgcgatattgatatcaatgtgcggattatttctgccactcaccgtgatctg
ccaaaagcgatggcgcgcggggaattccgcgaagatctctattaccgcctcaacgttgtc
agcctgaaaattccggcactggcggagcgcacagaagacattccgctactggcaaatcac
ctgttgcgccaggcggcagagcgacataaaccgtttgtccgcgcgttctctaccgatgcg
atgaaacgcctgatgaccgcgagctggccgggtaatgtgcgccagttggtcaacgtgatt
gaacagtgcgtggcgctgacctcatctccggtgattagtgatgcgctggtggagcaggcg
ctggagggtgaaaatacggcgctgccaacctttgttgaggcacgtaatcagtttgaactc
aactatttgcgtaagctgctgcaaatcaccaaaggcaacgtcacccacgcggcgagaatg
gcggggcgcaaccggacagaattttataaactgctttcccgacacgagctggatgcaaac
gatttcaaggaatga
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