Escherichia coli K-12 W3110: JW2798
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Entry
JW2798 CDS
T00068
Symbol
nudH
Name
(GenBank) nucleotide hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW2798 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecj03019
]
JW2798 (nudH)
Messenger RNA biogenesis [BR:
ecj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JW2798 (nudH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
BAE76899
UniProt:
P0A776
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2967103..2967633)
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaacgtaggtatcgtgatttgtaatcgccagggg
caggtaatgtgggcccggcgatttggtcagcactcctggcaatttccgcaaggcggaatc
aaccccggagaatccgcagagcaggcgatgtaccgtgaattgtttgaagaagtaggatta
agccgcaaagacgttcgaatccttgcttcaacgcgtaactggttgcgctacaaattaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccaaaaacaaaaatggttt
ctcttgcagctggtgagcggcgatgcagaaatcaatatgcaaaccagcagtacaccagag
tttgacggctggcgatgggtaagttactggtatccggtcagacaggtggtgtcatttaaa
cgtgatgtctaccgtagggtaatgaaagagttcgcgagtgtggtgatgtcactgcaggaa
aatacgccaaaaccacaaaacgcatctgcttatcgacgtaaaagaggttaa
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integrated database retrieval system
