Escherichia coli K-12 W3110: JW2905
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Entry
JW2905 CDS
T00068
Symbol
speA
Name
(GenBank) biosynthetic arginine decarboxylase, PLP-binding
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00330
Arginine and proline metabolism
ecj01100
Metabolic pathways
ecj01110
Biosynthesis of secondary metabolites
Module
ecj_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JW2905 (speA)
Enzymes [BR:
ecj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
JW2905 (speA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
BAE77001
UniProt:
P21170
Structure
PDB
PDBj
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All DBs
Position
complement(3082591..3084567)
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AA seq
658 aa
AA seq
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MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC
PDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY
FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI
RLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK
SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKL
GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE
SGRAVTAHHTVLVSNIIGVERNEYTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREW
LHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQER
MADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDG
DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS
DEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacatgtctatgggtttgccttcgtcagcgggcgaacacggtgtactacgc
tccatgcaggaggttgcaatgagctcccaggaagccagcaagatgctgcgtacttacaat
attgcctggtggggcaataactactatgacgttaacgagctgggccacattagcgtgtgc
ccggacccggacgtcccggaagctcgcgtcgatctcgcgcagttagtgaaaactcgtgaa
gcacagggccagcgtctgcctgcactgttctgtttcccacagatcctgcagcaccgtttg
cgttccattaacgccgcgttcaaacgtgcgagggaatcctacggctataacggcgattac
ttccttgtttatccgatcaaagttaaccagcaccgccgcgtgattgagtccctgattcat
tcgggcgaaccgctgggtctggaagccggttccaaagccgagttgatggcagtactggca
catgctggcatgacccgtagcgtcatcgtctgcaacggttataaagaccgcgaatatatc
cgcctggcattaattggcgagaagatggggcacaaggtctatctggtcattgagaagatg
tcagaaatcgccattgtgctggatgaagcagaacgtctgaatgtcgttcctcgtctgggc
gtgcgtgcacgtctggcttcgcagggttcgggtaaatggcagtcctccggcggggaaaaa
tcgaagttcggcctggctgcgactcaggtactgcaactggttgaaaccctgcgtgaagcc
gggcgtctcgacagcctgcaactactgcacttccacctcggttcgcagatggcgaatatt
cgcgatatcgcgacaggcgttcgtgaatccgcgcgtttctatgtggaactgcacaagctg
ggcgtcaatattcagtgcttcgacgtcggcggcggtctgggcgtggattatgaaggtact
cgttcgcagtccgactgttcggtgaactacggcctcaatgaatacgccaacaacattatc
tgggcgattggcgatgcgtgtgaagaaaacggtctgccgcatccgacggtaatcaccgaa
tcgggtcgtgcggtgactgcgcatcacaccgtgctggtgtctaatatcatcggcgtggaa
cgtaacgaatacacggtgccgaccgcgcctgcagaagatgcgccgcgcgcgctgcaaagc
atgtgggaaacctggcaggagatgcacgaaccgggaactcgccgttctctgcgtgaatgg
ttacacgacagtcagatggatctgcacgacattcatatcggctactcttccggcatcttt
agcctgcaagaacgtgcatgggctgagcagctttatttgagcatgtgccatgaagtgcaa
aagcagctggatccgcaaaaccgtgctcatcgtccgattatcgacgagctgcaggaacgt
atggcggacaaaatgtacgtcaacttctcgctgttccagtcgatgccggacgcatggggg
atcgaccagttgttcccggttctgccgctggaagggctggatcaagtgccggaacgtcgc
gctgtgctgctggatattacctgtgactctgacggtgctatcgaccactatattgatggt
gacggtattgccacgacaatgccaatgccggagtacgatccagagaatccgccgatgctc
ggtttctttatggtcggcgcatatcaggagatcctcggcaacatgcacaacctgttcggt
gataccgaagcggttgacgtgttcgtcttccctgacggtagcgtagaagtagaactgtct
gacgaaggcgataccgtggcggacatgctgcaatatgtacagctcgatccgaaaacgctg
ttaacccagttccgcgatcaagtgaagaaaaccgatcttgatgctgaactgcaacaacag
ttccttgaagagttcgaggcaggtttgtacggttatacttatcttgaagatgagtaa
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