KEGG   Escherichia coli K-12 W3110: JW3053
Entry
JW3053            CDS       T00068                                 
Symbol
ygjM
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecj03000]
    JW3053 (ygjM)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecj02048]
    JW3053 (ygjM)
Transcription factors [BR:ecj03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    JW3053 (ygjM)
Prokaryotic defense system [BR:ecj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    JW3053 (ygjM)
SSDB
Motif
Pfam: HTH_3 HrpB2 TPR_3 HTH_31
Other DBs
NCBI-ProteinID: BAE77132
UniProt: P67701
Structure
LinkDB
Position
complement(3232384..3232800)
AA seq 138 aa
MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW
EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE
HAKKLATRFGISPALFID
NT seq 417 nt   +upstreamnt  +downstreamnt
atgattgcgattgccgacatcttgcaagcaggagaaaagctaactgctgtggcacctttt
ctggcgggtattcagaacgaggaacaatacacccaggcgctggaactggtagatcatctg
ctgctcaacgatcctgaaaaccccttgctggatctggtgtgtgccaaaataaccgcgtgg
gaagaatcagcgcccgaatttgcggaatttaatgccatggctcaagccatgcctggcggt
atagccgtgattcgtacccttatggatcaatatggtttaaccctttccgatctgccggaa
attggcagtaaatctatggtgtcacgcgttttgagcgggaagaggaaattaacgctggaa
cacgctaaaaaattggcaacgcgattcggcatttctcccgccttgtttattgattaa

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