Escherichia coli K-12 W3110: JW3164
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Entry
JW3164 CDS
T00068
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00541
Biosynthesis of various nucleotide sugars
ecj01100
Metabolic pathways
ecj01250
Biosynthesis of nucleotide sugars
Module
ecj_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JW3164 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecj01005
]
JW3164 (kdsD)
Enzymes [BR:
ecj01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
JW3164 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
ecj01005
]
Lipid A
JW3164 (kdsD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
BAE77241
UniProt:
P45395
Structure
PDB
PDBj
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All DBs
Position
3341121..3342107
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AA seq
328 aa
AA seq
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MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS
GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK
RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK
ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT
VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR
HITSVMVADGDHLLGVLHMHDLLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgtagagttacaaccgggttttgactttcagcaagcaggtaaagaagtcctg
gcgattgaacgtgaatgcctggcggagcttgatcaatacatcaatcagaatttcacgctt
gcctgtgaaaagatgttctggtgtaaagggaaagttgtcgtcatggggatgggaaaatcg
gggcatattgggcgaaaaatggcggcaacgtttgccagcaccggtacaccttcatttttc
gtccatcctggtgaagccgcgcatggtgatttaggcatggttaccccacaggatgtggtg
attgctatctctaactctggtgaatccagcgaaatcacggccttaattccagtgcttaag
cgtcttcacgtaccgttaatctgcatcaccggtcgcccggagagcagcatggcgcgcgcc
gcagatgtgcatctgtgtgttaaagtagcgaaagaagcctgtccgttagggctggcaccg
accagcagcaccaccgccacgctggttatgggcgatgccctcgctgtcgcgctgttaaaa
gcacgcggctttactgctgaagattttgcgctctcacacccaggcggcgcactgggtcgt
aaacttctgctgcgcgtaaacgatattatgcatacgggcgatgagatcccgcatgttaag
aaaacggccagtctgcgtgacgcgttgctggaagttacccgcaaaaatcttggtatgact
gtcatttgcgatgacaatatgatgattgaaggcatctttaccgacggtgatttacgccgt
gtcttcgatatgggcgtggatgttcgtcagttaagtattgccgatgtgatgacgccgggg
ggaatacgtgtgcgccctggcattctggccgttgaggcactgaacttaatgcagtcccgc
catatcacctccgtgatggttgccgatggcgaccatttactcggtgtgttacatatgcat
gatttactgcgtgcaggcgtagtgtaa
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