Escherichia coli K-12 W3110: JW3250
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Entry
JW3250 CDS
T00068
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecj03009
]
JW3250 (rsmB)
Enzymes [BR:
ecj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JW3250 (rsmB)
Ribosome biogenesis [BR:
ecj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JW3250 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_37
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Methyltransf_5
Methyltransf_15
Cons_hypoth95
Ubie_methyltran
Methyltransf_33
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
BAE78003
UniProt:
P36929
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(4203920..4205209)
Genome browser
AA seq
429 aa
AA seq
DB search
MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW
LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING
VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR
THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT
WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK
QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI
WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG
FFYAKLIKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaacgtaatttacgtagcatggcggcccaggccgttgaacaagtcgtcgag
caagggcaatcattaagcaacattctgccaccgctccagcaaaaagtttccgataaagac
aaagcacttcttcaagagttgtgctttggcgtactgcgtacgctttcgcagttagactgg
ctgattaataagttaatggcccgtccgatgaccggcaaacagcggaccgtgcattacctg
attatggttggtttgtatcaactgctttatacccgcattccacctcatgctgcgctggct
gaaacggttgaaggcgctatcgcaattaagcgtccgcaacttaaagggttgataaacggt
gtattacgccagttccagcgtcagcaagaagagttattagccgagtttaatgccagtgat
gcacgttatctgcatccttcctggttgctgaagcgtctgcaaaaagcgtatccagagcag
tggcaatccatcgtcgaagccaataaccagcgtccgccaatgtggctgcgtattaatcgt
acgcatcattcccgcgacagctggcttgcattgctggatgaagcaggaatgaaaggtttc
ccgcatgcggattaccctgatgctgtacgtctggaaacacctgcacctgttcatgcgcta
cctggttttgaagacggatgggttaccgttcaggatgcatcagcacaaggttgcatgacc
tggcttgcgccacaaaacggtgaacacattttggatctttgtgccgcccccggcggtaaa
acaacgcatatccttgaggtggcaccagaagcgcaggttgttgcggttgatatcgacgaa
cagcgcctctctcgggtttacgacaatttaaaacgccttggtatgaaggcgaccgtgaaa
caaggtgatggccgttacccttctcaatggtgtggcgagcaacagtttgatcgcatttta
ttagatgcgccttgttcagcaaccggtgtgattcgtcgccatccagatattaaatggtta
cgtcgcgatcgcgatatcccggaactcgcgcaattgcagtctgaaattctcgacgccatt
tggccgcatttaaaaaccggtggaactctggtctatgccacctgttcggtgttaccggaa
gagaatagcctgcagattaaagcctttttgcaacgtaccgctgatgccgaactttgcgaa
acaggaacaccagagcaaccgggtaaacaaaatctacctggtgccgaagagggcgacggc
ttcttttacgctaagctaatcaaaaagtga
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