Escherichia coli K-12 W3110: JW3598
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Entry
JW3598 CDS
T00068
Symbol
rfaK
Name
(GenBank) lipopolysaccharide core biosynthesis
KO
K03277
heptosyltransferase IV [EC:2.4.-.-]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00540
Lipopolysaccharide biosynthesis
ecj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JW3598 (rfaK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecj01005
]
JW3598 (rfaK)
Lipopolysaccharide biosynthesis proteins [BR:
ecj01005
]
Core region
JW3598 (rfaK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BAE77669
UniProt:
P27242
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All DBs
Position
3841103..3842176
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AA seq
357 aa
AA seq
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MRLGTFHKKKRFYINKIKINFLSFLFRNKINNQITDPAQVKSCLIIHDNNKLGDLIVLSS
IYRELYSKGVKITLLTNRKGGEFLSNNKNIFEFCIKESTGFLEMLTLCKHLRDLQFDIVL
DPFETMPSFKHSLILSSLKDSYILGFDHWYKRYYSFYHPHDECLKEHMSTRAIEILKHIY
GEGKFSTNYDLHLPVDVEDKIKEFIGDTRIVIINPLGAKKICRLTFEQIKVIYQEVKTHF
ENYRIIFTGLPQDLLTIPILEIETLPFDEFIYTVALTKYSDFVISVDTALVHIAAAYHKP
TLAFYPNSRTPEYPSHLIWSPNHHKSIQIVSPTYTVKDIDTETLTNSVKRLSCIDKK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaggaacttttcacaaaaagaaaagattttatataaacaaaatcaagattaat
ttcctttcttttttatttcgtaataaaataaataatcaaattacagatccagcacaagtt
aaatcatgccttattattcatgataataataaacttggtgatctaattgtattaagttcg
atttatcgtgaactttatagtaaaggggttaaaataactcttctcacaaatagaaagggt
ggggaatttctctctaataataaaaatatatttgagttctgtattaaagaatcaaccggt
tttcttgaaatgcttactctatgtaagcatctgcgggatttacagttcgatattgtatta
gacccctttgaaactatgccctcatttaagcatagcttaatattatcaagtttaaaagat
tcttacattctgggttttgatcattggtataagcgttactattcattttaccatccccac
gatgaatgtttaaaagaacatatgagtacacgagcaatagaaatactgaagcatatttat
ggtgagggtaaattttccaccaactacgacttgcatttaccagtagatgttgaagataaa
ataaaagaatttattggagatacaagaatagtcattattaatccattaggtgcaaaaaaa
atatgccgtcttacgtttgagcaaataaaagttatatatcaagaagtgaaaacacacttt
gaaaattatcggattatatttaccgggttaccgcaagatttattgacaataccaatactt
gaaatcgaaacactaccatttgatgagtttatttataccgttgcgttgaccaagtatagt
gattttgtcatttctgttgatacagctcttgttcatatcgctgcggcttatcataaacca
acgcttgcattttaccctaattcacgtactccggaatatccctcgcatttaatttggtcc
ccgaatcatcataaatctatacaaatagtatccccaacatatacggtaaaagatatcgat
actgaaactttaactaattcagtaaagagattaagttgtatagataagaagtga
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