Escherichia coli K-12 W3110: JW3678
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Entry
JW3678 CDS
T00068
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj03030
DNA replication
ecj03430
Mismatch repair
ecj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW3678 (dnaN)
03430 Mismatch repair
JW3678 (dnaN)
03440 Homologous recombination
JW3678 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecj03032
]
JW3678 (dnaN)
03400 DNA repair and recombination proteins [BR:
ecj03400
]
JW3678 (dnaN)
Enzymes [BR:
ecj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW3678 (dnaN)
DNA replication proteins [BR:
ecj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW3678 (dnaN)
DNA repair and recombination proteins [BR:
ecj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW3678 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BAE77593
UniProt:
P0A988
Structure
PDB
PDBj
LinkDB
All DBs
Position
3758094..3759194
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AA seq
366 aa
AA seq
DB search
MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV
QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE
EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccgtagaacgtgagcatttattaaaaccgctacaacaggtgagcggtccg
ttaggtggtcgtcctacgctaccgattctcggtaatctgctgttacaggttgctgacggt
acgttgtcgctgaccggtactgatctcgagatggaaatggtggcacgtgttgcgctggtt
cagccacacgagccaggagcgacgaccgttccggcgcgcaaattctttgatatctgccgt
ggtctgcctgaaggcgcggaaattgccgtgcagctggaaggtgaacggatgctggtacgc
tccgggcgtagccgtttttcgctgtctaccctgccagcggcggatttcccgaacctcgat
gactggcagagtgaagtcgaatttaccctgccgcaggcaacgatgaagcgtctgattgaa
gcgacccagttttctatggcgcatcaggacgttcgctattacttaaatggtatgctgttt
gaaaccgaaggtgaagaactgcgcaccgtggcaaccgacggccaccgtctggcggtctgt
tcaatgccaattggtcaatctttgccaagccattcggtgatcgtaccgcgtaaaggcgtg
attgaactgatgcgtatgctcgacggcggcgacaatccgctgcgcgtacagattggcagc
aacaacattcgcgcccacgttggcgactttatcttcacctccaaactggtggatggtcgc
ttcccggattatcgccgcgttctgccgaagaacccggacaaacatctggaagctggctgc
gatctgctcaagcaggcgtttgctcgcgcggcgattctctctaacgagaaattccgcggc
gtacgtctttatgtcagcgaaaaccagctgaaaatcaccgccaacaacccggaacaggaa
gaagcggaagagatcctcgacgttacctatagcggtgcggagatggaaatcggcttcaac
gtcagttatgtgctggatgttctgaacgcgctgaaatgcgaaaacgtccgcatgatgctg
accgattcggtttccagcgtgcagattgaagatgcggccagccagagcgcggcttatgtt
gtcatgccaatgagactgtaa
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