Escherichia coli K-12 W3110: JW4200
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Entry
JW4200 CDS
T00068
Symbol
treR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW4200 (treR)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JW4200 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_3
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_26
HTH_Crp_2
CENP-B_N
MarR
HTH_29
HTH_28
Peripla_BP_4
HHH
TrmB
HTH_AraC
HTH_38
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAE78240
UniProt:
P36673
Structure
PDB
PDBj
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All DBs
Position
complement(4470979..4471926)
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagatatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagctcacccgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgacccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggagtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttactggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaaaatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcacagtgacgtgacaaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgccctgccagggcttgctatgaagcaa
ggctatgagaacgttgcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccgttaatgaaattcctccatccggagatcgtaaccgta
gatcccggttacgccgaagctggacgccaggcggcttgccagttgatcgcgcaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
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