Escherichia coli K-12 W3110: JW4313 Help Entry JW4313            CDS       T00068                                  Symbol hsdR Name (GenBank) endonuclease R   KO K01153   type I restriction enzyme, R subunit [EC:3.1.21.3] Organism ecj  Escherichia coli K-12 W3110 Brite KEGG Orthology (KO) [BR:ecj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:ecj02048]     JW4313 (hsdR) Enzymes [BR:ecj01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters     3.1.21.3  type I site-specific deoxyribonuclease      JW4313 (hsdR) Prokaryotic defense system [BR:ecj02048]  Restriction and modification system (R-M system)   Type I R-M system    JW4313 (hsdR) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 PhoH UvrD-helicase Flavi_DEAD SLFN-g3_helicase AAA_19 MRP-S26 Motif Other DBs NCBI-ProteinID:  BAE78340 UniProt:  P08956 LinkDB All DBs Position complement(4587929..4591495) Genome browser AA seq 1188 aa AA seqDB search MLWALNIWTGPHSNGLITMMNKSNFEFLKGVNDFTYAIACAAENNYPDDPNTTLIKMRMF GEATAKHLGLLLNIPPCENQHDLLRELGKIAFVDDNILSVFHKLRRIGNQAVHEYHNDLN DAQMCLRLGFRLAVWYYRLVTKDYDFPVPVFVLPERGENLYHQEVLTLKQQLEQQVREKA QTQAEVEAQQQKLVALNGYIAILEGKQQETEAQTQARLAALEAQLAEKNAELAKQTEQER KAYHKEITDQAIKRTLNLSEEESRFLIDAQLRKAGWQADSKTLRFSKGARPEPGVNKAIA EWPTGKDETGNQGFADYVLFVGLKPIAVVEAKRNNIDVPARLNESYRYSKCFDNGFLRET LLEHYSPDEVHEAVPEYETSWQDTSGKQRFKIPFCYSTNGREYRATMKTKSGIWYRDVRD TRNMSKALPEWHRPEELLEMLGSEPQKQNQWFADNPGMSELGLRYYQEDAVRAVEKAIVK GQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGD TFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYIL DKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATPALHTVQIFGEPVYRYTYRTAV IDGFLIDQDPPIQIITRNAQEGVYLSKGEQVERISPQGEVINDTLEDDQDFEVADFNRGL VIPAFNRAVCNELTNYLDPTGSQKTLVFCVTNAHADMVVEELRAAFKKKYPQLEHDAIIK ITGDADKDARKVQTMITRFNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVRSRILYEQ MKGRATRLCPEVNKTSFKIFDCVDIYSTLESVDTMRPVVVRPKVELQTLVNEITDSETYK ITEADGRSFAEHSHEQLVAKLQRIIGLATFNRDRSETIDKQVRRLDELCQDAAGVNFNGF ASRLREKGPHWSAEVFNKLPGFIARLEKLKTDINNLNDAPIFLDIDDEVVSVKSLYGDYD TPQDFLEAFDSLVQRSPNAQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRKAWK ETRNEDIAARLIGHIRRAAVGDALKPFEERVDHALTRIKGENDWSSEQLSWLDRLAQALK EKVVLDDDVFKTGNFHRRGGKAMLQRTFDDNLDTLLGKFSDYIWDELA NT seq 3567 nt NT seq  +upstreamnt  +downstreamnt atgttatgggccttaaatatttggacaggcccgcacagcaatggattaataacaatgatg aataaatccaattttgaattcctgaagggcgtcaacgacttcacttatgccatcgcctgt gcggcggaaaataactacccggatgatcccaacacgacgctgattaaaatgcgtatgttt ggcgaagccacagcgaaacatcttggtctgttactcaacatccccccttgtgagaatcaa cacgatctcctgcgtgaactcggcaaaatcgcctttgttgatgacaacatcctctctgta tttcacaaattacgccgcattggtaaccaggcggtgcacgaatatcataacgatctcaac gatgcccagatgtgcctgcgactcgggttccgcctggctgtctggtactaccgtctggtc actaaagattatgacttcccggtgccggtgtttgtgttgccggaacgtggtgaaaacctc tatcaccaggaagtgctgacgctaaaacaacagcttgaacagcaggtgcgagaaaaagcg cagactcaggcagaagtcgaagcgcaacagcagaagctggttgccctgaacggctatatc gccattctggaaggcaaacagcaggaaaccgaagcgcaaacccaggctcgccttgcggca ctggaagcacagctcgccgagaagaacgcggaactggcaaaacagaccgaacaggaacgt aaggcttaccacaaagaaattaccgatcaggccatcaagcgcacactcaaccttagcgaa gaagagagtcgcttcctgattgatgcgcaactgcgtaaagcaggctggcaggccgacagc aaaaccctgcgcttctccaaaggcgcacgtccggaacccggcgtcaataaagccattgcc gaatggccgaccggaaaagatgaaacgggtaatcagggctttgcggattatgtgctgttt gtcggcctcaaacccatcgcggtggtagaggcgaaacgtaacaatatcgacgttcccgcc aggctcaatgagtcgtatcgctacagtaaatgtttcgataatggcttcctgcgggaaacc ttgcttgagcactactcaccggatgaagtgcatgaagcagtgccagagtatgaaaccagc tggcaggacaccagcggcaaacaacggtttaaaatccccttctgctactcgaccaacggg cgcgaataccgcgcaacaatgaagaccaaaagcggcatctggtatcgcgacgtgcgtgat acccgcaatatgtcgaaagccttacccgagtggcaccgcccggaagagctgctggaaatg ctcggcagcgaaccgcaaaaacagaatcagtggtttgccgataaccctggcatgagcgag ctgggcctgcgttattatcaggaagatgccgtccgcgcggttgaaaaggcaatcgtcaag gggcaacaagagatcctgctggcgatggcgaccggtaccggtaaaacccgtacggcaatc gccatgatgttccgcctgatccagtcccagcgttttaaacgcattctcttccttgtcgac cgccgttctcttggcgaacaggcgctgggcgcgtttgaagatacgcgtattaacggcgac accttcaacagcattttcgacattaaagggctgacggataaattcccggaagacagcacc aaaattcacgttgccaccgtacagtcgctggtgaaacgcaccctgcaatcagatgaaccg atgccggtggcccgttacgactgtatcgtcgttgacgaagcgcatcgcggctatattctc gataaagagcagaccgaaggcgaactgcagttccgcagccagctggattacgtctctgcc taccgtcgcattctcgatcacttcgatgcggtaaaaatcgctctcaccgccaccccggcg ctacatactgtgcagattttcggcgagccggtttaccgttatacctaccgtaccgcggtt atcgacggttttctgatcgaccaggatccgcctattcagatcatcacccgcaacgcgcag gagggggtttatctctccaaaggcgagcaggtagagcgcatcagcccgcagggagaagtg atcaatgacaccctggaagacgatcaggattttgaagtcgccgactttaaccgtggcctg gtgatcccggcgtttaaccgcgccgtctgtaacgaactcaccaattatcttgacccgacc ggatcgcaaaaaacgctggtcttctgcgtcaccaatgcccatgccgatatggtggtggaa gagctgcgtgccgcgttcaagaaaaagtatccgcaactggagcacgacgcgatcatcaag atcaccggtgatgccgataaagacgcgcgcaaagtgcagaccatgatcacccgcttcaat aaagagcggctgcccaatatcgtggtaaccgtcgacctgctgacgaccggcgtcgatatt ccgtcgatctgtaatatcgtgttcctgcgtaaagtacgcagccgcattctgtacgaacag atgaaaggccgcgccacgcgcttatgcccggaggtgaataaaaccagctttaagattttt gactgtgtcgatatctacagcacgctggagagcgtcgacaccatgcgtccggtggtggtg cgcccgaaggtggaactgcaaacgctggtcaatgaaattaccgattcagaaacctataaa atcaccgaagcggatggccgcagttttgccgagcacagccatgaacaactggtggcgaag ctccagcgtatcatcggtctggccacgtttaaccgtgaccgcagcgaaacgatagataaa caggtgcgtcgtctggatgagctatgccaggacgcggcgggcgtgaactttaacggcttc gcctcgcgcctgcgggaaaaagggccgcactggagcgccgaagtctttaacaaactgcct ggctttatcgcccgtctggaaaagctgaaaacggacatcaacaacctgaatgatgcgccg atcttcctcgatatcgacgatgaagtggtgagtgtaaaatcgctgtacggtgattacgac acgccgcaggatttcctcgaagcctttgactcgctggtgcaacgttccccgaacgcgcaa ccggcattgcaggcagttattaatcgcccgcgcgatctcacccgtaaagggctggtcgag ctacaggagtggtttgaccgccagcactttgaggaatcttccctgcgcaaagcatggaaa gagacgcgcaatgaagatatcgccgcccggctgattggtcatattcgccgcgctgcggtg ggcgatgcgctgaaaccgtttgaggaacgtgtcgatcacgcgctgacgcgcattaagggc gaaaacgactggagcagcgagcaattaagctggctcgatcgtttagcgcaggcgctgaaa gagaaagtggtgctcgacgacgatgtcttcaaaaccggcaacttccaccgtcgcggcggg aaggcgatgctgcaaagaacctttgacgataatctcgataccctgctgggcaaattcagc gattatatctgggacgagctggcctga

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