Escherichia coli K-12 W3110: JW5206
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Entry
JW5206 CDS
T00068
Symbol
ydaM
Name
(GenBank) predicted diguanylate cyclase, GGDEF domain signalling protein
KO
K21088
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JW5206 (ydaM)
Enzymes [BR:
ecj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
JW5206 (ydaM)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS_9
PAS_8
Cas10-Cmr2_palm2
GGDEF_2
PAS
Motif
Other DBs
NCBI-ProteinID:
BAA14945
UniProt:
P77302
LinkDB
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Position
complement(1408277..1409509)
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AA seq
410 aa
AA seq
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MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK
YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS
ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN
MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT
EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND
LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA
KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcacaacttcaataccctggacttactcaccagtcctgtctggatcgtttcg
ccctttgaggaacagttaatttatgccaatagcgcggcgaaactgttgatgcaagacctc
acgtttagtcagctacgaaccggaccctattccgtctcctcacaaaaagaactgccgaaa
tacctctccgatctgcaaaaccaacacgatattatcgaaatcctcactgttcagcgtaaa
gaagaggaaacagcattgagctgtcggcttgttttgcgaaagctgacagaaacagaaccg
gtgattattttcgaaggtatcgaagcgccggcaacgctgggtttaaaagccagtcgctcg
gcaaattatcagcgcaaaaaacaaggtttttatgcgcgcttttttctgactaactctgca
ccaatgttgttgattgacccgtcacgagatggacaaatcgtcgatgctaacctcgccgcg
ctcaatttctatggttataaccatgaaacgatgtgccagaaacatacctgggaaataaat
atgctcgggcgtcgcgtcatgcctatcatgcatgaaatctcgcatttacccggtggtcat
aaacctttgaattttgttcataaactggcggatggttcgactcgtcatgtgcagacctat
gccggaccgattgaaatttatggcgacaagctcatgttatgtattgtgcatgatattact
gagcaaaaacggctggaggagcagctggaacatgctgctcaccatgacgcgatgaccgga
ttactgaatcggcgacagttttatcacattacggaaccaggccaaatgcagcatctcgcc
atcgctcaggattacagcttgttgctcatcgacaccgatcgttttaaacacattaacgat
ctctatgggcattctaaaggtgatgaggtgttatgcgccctcgcccgcaccctcgaaagt
tgcgctcgcaaaggcgatttggtgtttcgttggggaggcgaagagtttgtcttattgcta
ccaagaaccccactggataccgcgctttcgctggctgaaactatccgcgtaagcgtggca
aaagtgagtatttcgggcttaccacgctttaccgtcagcattggtgtggcgcatcacgaa
ggaaatgaaagcatcgatgaactgtttaaacgcgttgatgatgctttgtatcgggcgaaa
aatgatggacgcaaccgcgtgctggcggcataa
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