Escherichia coli K-12 W3110: JW5240
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Entry
JW5240 CDS
T00068
Symbol
ddpA
Name
(GenBank) D-Ala-D-Ala transporter subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW5240 (ddpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW5240 (ddpA)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JW5240 (ddpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
BAA15142
UniProt:
P76128
LinkDB
All DBs
Position
complement(1562645..1564195)
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AA seq
516 aa
AA seq
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MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPS
YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF
ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA
ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL
QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW
STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF
LYSDNDPNWEPIALATQSSLNKLGIIVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP
YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatcgatatcgtttcgtcccacattgctcgcgctcgtccttgccacaaatttc
ccggttgcgcacgccgccgtaccaaaagatatgctggtgattggtaaggccgccgatcca
caaaccctcgacccggcggtaacaatagataataacgactggacagtgacctacccgtct
tatcagcggctggttcagtacaaaacggacggtgataaaggctcaaccgacgttgaaggc
gatctggcaagtagctggaaagcgtctgacgatcaaaaagagtggacgttcaccctgaaa
gataatgctaaatttgccgatggcacacctgtcactgccgaagcagtaaaactttctttt
gagcggctactaaaaatcggccaggggccagcagaagcatttcccaaagatttaaagatt
gatgctcccgacgaacatacggtgaagtttacccttagccaaccattcgcaccgttcctc
tacacgctggcgaatgacggtgcatccattatcaatccggcggtcttaaaggaacatgca
gcggatgatgctcgcggcttcctcgcgcaaaataccgccggttccggaccatttatgctg
aaaagctggcaaaaaggtcagcaattagttctggtgccaaatccgcattacccaggcaat
aaaccgaacttcaaacgggtatcggtaaaaattattggtgaaagtgcctcccgtcgcctg
cagctctcccgtggcgacattgacattgccgatgcgctgccggtggatcaactcaacgcc
ctgaagcaggaaaataaagtcaatgtggcagagtatccgtcactgcgcgttacctatctg
tatctgaataacagcaaagcgcctcttaatcaggcggatctgcgtcgggccatttcctgg
tctaccgattatcagggcatggttaacggcattctgagtggtaacggaaaacagatgcgc
ggcccgattccggaaggcatgtggggctacgatgcgacggcaatgcaatacaaccatgac
gaaacgaaagccaaagccgaatgggataaagtgacgagcaaacccaccagcctgacgttt
ctctactccgataacgatccgaactgggagcctattgctctggcgacacaatccagtctc
aacaagctgggcatcattgtgaagctggaaaagctggcgaacgccaccatgcgcgacaga
gtgggtaaaggtgattacgacattgcgattggcaactggagtccggattttgccgacccg
tatatgtttatgaattactggtttgagtcagacaaaaaaggtctgccgggtaaccgctcg
ttctatgaaaacagtgaggtcgataagttactgcgcaatgcgcttgcgaccaccgaccag
acgcagcgtacccgggactaccagcaggcacagaaaatcgtcattgatgacgctgcttat
gtgtacctgttccagaaaaactaccaactggcgatgaacaaagaggtgaaaggctttgtg
ttcaatcccatgctggaacaggtcttcaatatcaataccatgagtaaataa
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