Escherichia coli K-12 W3110: JW5925
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Entry
JW5925 CDS
T00068
Symbol
yghJ
Name
(GenBank) predicted inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
ecj
Escherichia coli K-12 W3110
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
TonB_N
PQQ
CooC_C
Motif
Other DBs
NCBI-ProteinID:
BAE77034
UniProt:
P0CK95
LinkDB
All DBs
Position
complement(3113206..3117768)
Genome browser
AA seq
1520 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPG
EDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLVTSSNS
CPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPV
VPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGV
TGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQ
NNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTGQAKEI
DTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYG
STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVT
RDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDM
KNFMENVLRYLSDDKWKPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGISVE
HLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNKG
GSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWV
YERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDE
ADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYTQL
SLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNDT
SYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMM
NPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFA
GNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDA
SGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESD
AFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKH
RFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGAT
EVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARGGAGDRLLMYAQLKEWA
EKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAESNG
NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLDLP
KPEQGPETINQVTEHKMSAE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttgagcgcaaccctg
ttagccggttgtgatggcggtggttccggatcttcctccgatacgccgcctgtagattct
ggaacagggtctttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcct
gagccaacgccggacccagagcctacgccagaaccgatacctgatcctgaaccaacacca
gaaccggagccagaacctgttcctacgaaaacgggttatctgaccctgggcggaagccag
cgggtaactggtgctacctgtaatggtgaatccagcgatggctttacatttaaacctggc
gaggacgttacttgcgtggcgggtaacacgacaattgccaccttcaacactcagtcagaa
gctgcgcgtagcttgcgtgcggttgaaaaagtgtcgtttagccttgaggacgcgcaagaa
ctggcgggctccgatgacaagaaaagcaatgcggtttcgctggtaacgtccagtaacagc
tgtccggcgaatacagaacaggtttgtctgacgttctcctcggtgatcgagagtaaacgc
ttcgactcgctgtataagcaaatcgatctggcaccggaagagttcaaaaagctggtcaat
gaagaggtggaaaacaatgctgcgaccgataaagcgccatccactcatacttcaccggtc
gtgcccgtcaccacgccgggaacaaaaccggatctgaacgcttccttcgtgtcggctaac
gcggaacagttttatcagtatcaacccactgaaatcattctctctgaaggtcgactggtc
gatagccagggatatggtgttgctggcgtcaactactacaccaattcaggccgtggcgtg
acaggggaaaatggtgaattttcctttagctggggcgaaaccatctcctttggtatcgat
acctttgaactgggttcagtgcgcggcaataagtcgaccattgcgctgactgaactgggt
gatgaagttcgcggggcgaatattgatcagcttattcatcgctattcgacgaccgggcaa
aataatacccgtgttgttccggacgatgtacgcaaggtctttgccgaatatcccaacgtg
atcaacgagattatcaatctctcgttatccaacggtgcgacgctgggggaaggtgagcaa
gtcgttaatctgcctaacgaatttattgagcagtttaatacgggtcaggccaaagagatc
gataccgcgatttgtgcgaaaaccgatggttgtaacgaggctcgctggttctcgctgacg
acgcgcaatgttaatgacggccagattcagggcgttatcaacaagctgtggggcgtggat
acgaactacaaatctgtcagcaagttccatgtattccatgactccaccaacttctatggc
agcacgggtaatgcgcgcggtcaggcggtggtgaatatctccaacgcggccttcccgatt
ctgatggcgcgtaatgataaaaactactggctggccttcggcgaaaaacgcgcctgggat
aaaaacgagctggcgtacattacggaagcgccttctcttgttgagccggaaaacgttacg
cgcgataccgccacctttaacctgccgtttatttcgctggggcaagtcggtgagggcaaa
ctgatggttatcggtaacccacactacaacagcattttgcgttgcccgaacggttacagc
tggaacgggggcgttaataaagatgggcagtgtacgctcaacagcgacccggatgacatg
aagaacttcatggagaacgtgctgcgctatctgtccgacgataaatggaagccggacgcg
aaagccagcatgaccgtaggcaccaacctggatactgtctattttaaacgtcatggtcag
gttacaggaaacagcgctgcgttcgacttccatccggattttgcgggcatctctgttgag
catttaagtagctatggcgatctcgatccgcaggaaatgccgctgctgatccttaacggc
tttgaatatgtgactcaggtgggtaacgatccttatgcaatcccgctgcgtgcagatacc
agcaaaccgaagctgactcagcaggatgtgaccgatctgatcgcctatctgaacaaaggt
ggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcgtctggt
tttgtgcgtctgttggatgccgcaggtctgtcgatggcactgaacaagtcggtagtaaat
aacgatccgcaagggtatccgaaccgcgttcgtcagcagcgcgcaacgggcatttgggtc
tatgaacgttatcctgccgtagatggtgcgctgccgtacaccatcgatagtaagacaggg
gaagttaagtggaaatatcaggtagaaaacaaacctgatgacaaaccgaagctggaagtt
gccagctggctggaagatgtagatggcaaacaggaaacgcgttatgcctttattgatgag
gccgatcataaaacagaggattctctgaaggctgcgaaggagaaaattttcgccgcgttc
ccggggctgaaagagtgtactaatccggcatatcactatgaggtcaactgcctggaatat
cgtcctggcacgggggttccggttactggtggcatgtatgttccacagtatacgcaacta
agccttaacgccgacactgcaaaagcgatggtgcaggctgcggatttaggcaccaacatt
cagcgtctgtatcagcatgagctctacttccggaccaatggtcgcaaaggtgagcgtctg
agcagcgtcgatctggaacgtctgtaccagaacatgtcggtctggctgtggaacgatacg
agctatcgttatgaagaaggcaaaaatgacgagctgggctttaaaacgttcaccgagttc
ctgaactgctacgccaatgatgcctatgcaggcggcaccaagtgttctgcagatctgaaa
aaatcgctggtcgataacaacatgatctacggtgacggtagcagcaaagcgggcatgatg
aacccgagctacccgctcaactatatggaaaaaccgctgacacgcctgatgctgggccgt
tcctggtgggatctgaacatcaaagttgatgtcgagaagtatccgggagcagtatcggaa
gagggacagaacgttactgaaaccatcagcctgtactcgaatccgaccaaatggtttgca
ggtaacatgcagtcaactggcctgtgggcaccggctcagaaagaggtcaccattaagtcc
aatgcgaacgttcctgtgaccgtcaccgtggcgctggctgacgacctgaccggacgtgag
aagcatgaagttgcgctgaaccgtccgccaagagtgactaaaacgtactctctggacgct
agcggtacggtgaagttcaaggtgccttacggtggcctgatttatatcaagggcaatagc
tctaccaatgaatctgccagcttcacctttactggcgtggtaaaagcaccgttctataaa
gacggcgcatggaaaaacgatctgaactcaccggctccgctgggtgagctggaatcagac
gctttcgtctataccacaccgaagaagaacctgaatgccagcaattacactggcggactg
gagcaattcgctaacgatctggatacctttgccagctcgatgaatgacttctacggccgt
gatagcgaagacggtaagcaccggatgtttacctataaaaacttgccgggccacaaacat
cgtttcaccaacgatgtgcagatctccatcggtgatgcgcattcgggttatccggtaatg
aacagcagcttctcgccgaacagcaccacgctgccgacgacgccgctgaacgactggctg
atctggcatgaagtcggtcataacgccgcagaaacgccgttgactgtaccgggtgcaact
gaagtcgctaacaacgtgctggcgctgtacatgcaggatcgttatctcggcaagatgaac
cgtgtcgctgacgatattaccgtcgcaccggaatatctggaggagagcaacaaccaggca
tgggcacgcggcggtgcgggtgaccgtctgctgatgtacgcacagctgaaggaatgggca
gagaaaaactttgatatcaagaaatggtatccagatggcactcctctgccagagttttac
agcgagcgtgaagggatgaaaggctggaacctgttccagttgatgcatcgtaaagcacgc
ggcgatgaggtcagcaatgacaagtttggcggcaagaattactgtgctgaatccaacggt
aacgcagcggacacgctgatgctgtgtgcctcctgggtcgcccagacggatctttcggag
ttctttaagaaatggaatccgggcgcgaatgcttaccagctgccgggggcgagcgagatg
agcttcgagggcggtgtgagccagtcggcttacaacacgctcgcgtcactcgatctgccg
aaaccggaacagggaccggaaaccattaatcaggttaccgagcataagatgtctgccgag
taa
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integrated database retrieval system
