Escherichia coli 55989 (EAEC): EC55989_0137
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Entry
EC55989_0137 CDS
T00826
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eck
Escherichia coli 55989 (EAEC)
Pathway
eck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EC55989_0137 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eck03019
]
EC55989_0137 (pcnB)
Enzymes [BR:
eck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EC55989_0137 (pcnB)
Messenger RNA biogenesis [BR:
eck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EC55989_0137 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
CAU96024
UniProt:
B7LGK5
LinkDB
All DBs
Position
complement(157830..159248)
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGYGYDTYKLLCEYHLFQPLFPTITRYFTENGDSPMER
IIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERN
AELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgtactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtgatcccg
cgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctcaacaaagcgggatacgaagcctggctggttggcggcggcgtgcgcgacctgtta
cttggcaaaaagccgaaagattttgacgtaaccactaacgccacgcctgagcaggtgcgc
aaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtaatgttt
ggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtcagcgac
cgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttcggctcc
atcgaagaagacgcccagcgccgcgatttcactatcaacagcctctattacagcgtagcg
gattttaccgtccgtgattacgttggcggtatgaaggatctgaaggacggcgttatccgt
ctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctgcgcgcggta
cgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatccctcgc
ctcgctaccctgttgaacgatatcccaccggcacgcctgtttgaagaatcgcttaaactg
ctacaagcgggctacggttacgatacctataagctgttgtgtgaatatcatctgttccag
ccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatggagcgg
atcattgaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgcgtgaac
ccggcgttcctgtttgccgccatgttctggtacccactgctggagacggcacagaagatt
gcccaggaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgacgtgctg
gacgaagcctgccgttcactggcaatcccgaaacgtctgacgacgttaacccgcgatatc
tggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactgctggag
catcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgaacgtaac
gctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcgccaccagat
caaaaagggatgcttaacgagttggatgaagagccgtcaccgcgtcgccgtactcgtcgt
ccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga
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