Escherichia coli 55989 (EAEC): EC55989_0406
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Entry
EC55989_0406 CDS
T00826
Symbol
sbcD
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03547
DNA repair protein SbcD/Mre11
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eck03400
]
EC55989_0406 (sbcD)
DNA repair and recombination proteins [BR:
eck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EC55989_0406 (sbcD)
Archaeal homologous recombinant proteins
EC55989_0406 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CAU96280
UniProt:
B7L552
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All DBs
Position
complement(440915..442117)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQQYADACKLRGDQPLPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS
QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacctcagactggcatctcggccagaacttctacagtaaaagccgc
gaagctgaacatcaggcttttcttgactggctgctggaaacagcacaaacccatcaggtg
gatgcgattattgttgctggtgatgttttcgataccggctcgccgcccagttacgcccgc
acgttatacaaccgttttgttgtcaatttacagcaaactggctgtcatctggtggtactg
gcaggaaaccatgactcggtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatacgaccgtggtcgccagcgccggacatgcgccgcaaatcttgcctcgtcgcgacggg
acgccaggcgcagtgctgtgccccattccgtttttacgtccgcgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttactggcagcgattaccgattat
taccaacaacaatatgccgatgcctgcaaactgcgcggcgatcagcctctgcccatcatc
gccacgggacacttaacgaccgtgggtgccagtaaaagtgacgccgtgcgtgacatttat
attggcacgctggacgcgtttccagcacaaaactttccaccagccgactacatcgcgctc
gggcatattcaccgcgcacagattattggcggcatggaacatgttcgctattgcggctct
cccattccactgagttttgatgaatgcggaaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaacccatggcg
gtgctgaaaggcgatctggcgtcgattaccgcacagctggaacagtggcgcgatgtatca
caggagccgcctgtctggctggatatcgaaatcactactgatgagtatctgcatgatatt
cagcgcaaaatccaggcattaaccgaatcattgcctgttgaagtattgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactggaagaactggatgaatcgcagcag
caacgtctgcagcatcttttcaccacgacgttgcataccctcgccggagaacacgaagca
tga
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