Escherichia coli 55989 (EAEC): EC55989_0632
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Entry
EC55989_0632 CDS
T00826
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
eck
Escherichia coli 55989 (EAEC)
Pathway
eck03030
DNA replication
eck03430
Mismatch repair
eck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EC55989_0632 (holA)
03430 Mismatch repair
EC55989_0632 (holA)
03440 Homologous recombination
EC55989_0632 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eck03032
]
EC55989_0632 (holA)
03400 DNA repair and recombination proteins [BR:
eck03400
]
EC55989_0632 (holA)
Enzymes [BR:
eck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EC55989_0632 (holA)
DNA replication proteins [BR:
eck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EC55989_0632 (holA)
DNA repair and recombination proteins [BR:
eck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EC55989_0632 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAU96504
UniProt:
B7L9I4
LinkDB
All DBs
Position
complement(686024..687055)
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AA seq
343 aa
AA seq
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MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFAEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtagctgcggcacaaggattcgcagaacaccacactttttccattgatcccaacactgac
tggaatgcgatcttttcgttatgccaggctatgagtctgtttgccagtcgacaaacgcta
ttgctgttgttaccagaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctactgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagcttccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgcggcgaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggctcaggcactggagcgtttatcgctgctctggccagacggcaaactgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgagccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcttaagccagccgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagctggaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga
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