Escherichia coli 55989 (EAEC): EC55989_1248
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Entry
EC55989_1248 CDS
T00826
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eck03009
]
EC55989_1248 (ymfC)
Enzymes [BR:
eck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
EC55989_1248 (ymfC)
Ribosome biogenesis [BR:
eck03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EC55989_1248 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAU97107
UniProt:
B7LGR3
LinkDB
All DBs
Position
complement(1304545..1305198)
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AA seq
217 aa
AA seq
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MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQD
ALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgtaaacctgaaaaccagcccacgcgt
gtgatcctgttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgc
aaaacattaaaagaattcatcccggttcagggcgtttatgcagcaggtcgtcttgaccgc
gatagcgaagggttactggtgctgaccaataacggcgcgttgcaggcgcgtttaacccag
ccgggtaaacgcaccgggaaaatctattatgtgcaggtggaaggtattcccacacaagac
gcacttgaagccttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgccggc
gcggagctggttgacgaaccagcgtggttatggccgcggaatccaccaattcgtgaacgc
aaaagtattcccaccagctggctgaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggtttccccacgctgcgactgattcgctatgcgatggga
gattactctttggataatcttgccaatggcgaatggcgagaagtgacagattaa
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