Escherichia coli 55989 (EAEC): EC55989_1253
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Entry
EC55989_1253 CDS
T00826
Symbol
ycgF
Name
(GenBank) putative cyclic-di-GMP phosphodiesterase; blue-light sensing protein using FAD (BLUF)
KO
K21973
blue light- and temperature-responsive anti-repressor
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
EC55989_1253 (ycgF)
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Gene cluster
GFIT
Motif
Pfam:
EAL
BLUF
TEX47
Motif
Other DBs
NCBI-ProteinID:
CAU97112
UniProt:
B7LGR8
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Position
complement(1309303..1310514)
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AA seq
403 aa
AA seq
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MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM
IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT
YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCTLSPTINDHFAFHPIV
DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFAMAHALELGDKMIS
INLLPMTLVNEPDAVSFLLDEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI
SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS
AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccacccttatttatcgtagccatatacgtgacgacgaacctgtcaaaaaaatc
gaagaaatggtttcgatagcaaatcgcaggaacatgcagtctgacgtaacagggatctta
ctgtttaatggttctcattttttccagcttctggaaggtccggaagaacaggttaaaatg
atatatcgggctatatgccaggatccacggcactataatattgttgagctgctgtgcgat
tacgcgcctgctcgccgttttggcaaagcgggaatggaattatttgatttgcgcctgcac
gagcgagatgacgttttacaggccgtattcgacaaaggcacatcaaaatttcagctaact
tatgatgacagagcgctacaattttttcgtacttttgtccttgcaaccgaacaatcaacc
tatttcgagatccctgccgaagactcctggctttttatcgctgacggatctgataaagaa
cttgattcctgtaccctttcaccaactataaacgaccactttgcctttcatcctattgtc
gatcccttatcgcggcggataatcgcttttgaagccattgtgcaaaaaaatgaagatagc
ccatcagccatagcggttgggcagcgtaaagacggggaaatctacacagcggatctcaaa
agtaaggcgcttgcattcgcgatggcacacgcacttgagctcggtgataaaatgatttca
atcaatctattacctatgaccctggttaacgaacctgacgcagtctcttttttacttgat
gaaataaaggccaatgctctggtgcctgaacaaatcatcgttgaatttactgaaagtgaa
gttatatctcggtttgatgagtttgcagaagcgattaaatcgcttaaggctgccggtatc
agtgtagcaattgatcattttggcgcaggttttgccggtttgttactcctgtcacgcttc
cagcctgacagaattaaaatcagtcaggaattgattaccaatgttcataaaagcgggcca
cggcaggcaattattcaagcgatcataaaatgctgtacatcacttgaaattcaagtcagt
gctatgggcgtggcaacaccagaagagtggatgtggcttgaatccgcaggaattgagatg
tttcagggagatctgtttgctaaagctaaattgaatggtatcccttccatagcgtggcca
gagaaaaaataa
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