Escherichia coli 55989 (EAEC): EC55989_3382
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Entry
EC55989_3382 CDS
T00826
Symbol
yghJ
Name
(GenBank) inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
eck
Escherichia coli 55989 (EAEC)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
CAU99463
UniProt:
B7LGB2
LinkDB
All DBs
Position
complement(3462403..3466986)
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AA seq
1527 aa
AA seq
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MSLALLMNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTP
NPEPTPEPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSD
GFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNAL
SLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKA
PSTHTSPVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNY
YTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLI
HRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQF
KTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVF
HDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPS
IVRPENVTRETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCT
LNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKHGQVLGNSAPFAFHK
DFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTD
LIAYMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQ
RRSTPIWVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQV
TQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCLEYRPGTGVPVTGGM
YVPQYTQLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGLQGERLNSVDLERLYQNM
SVWLWNETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEE
SSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGVVNTNGETVTQNINLYS
APTKWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALADDLTGREKHEVSLNRPPRVT
KTYDLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAP
LGELESASFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYK
NLPGHKHRFANDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETP
LTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMY
AQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKN
YCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNT
LASLNLPKPKQGPETINKVTEYSMPAE
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacttgcgttattaatgaataagaaatttaaatataagaaatcgcttttagcggct
attttgagtgcaaccctgttagccggttgtgatggcggtggctccggatcttcctccgat
acgccgcctgtagattctggaacagggtctttgccggaagtgaaacctgatccaacacca
aacccggagccgacacctgagccaacgccggacccagaacctacgccggaaccgacacct
gatcctgagccaacaccagaaccggagccagaacctgttcctacgaaaacgggttatctg
actctgggcggaagcctgcgggtaactggtgatatcacctgtaatgatgaatccagcgat
ggctttacctttacaccaggcgacaaagtcacctgtgtggcagggaacaacacgacaatt
gctaccttcgacacccagtcagaagctgcgcgtagcctgcgtgcggttgaaaaagtgtcg
tttagtcttgaggacgcgcaagaactggcgggttccgacaacaagaaaagcaatgcgctc
tcgctggtcacctccatgaacagttgcccggcgaatacagaacaggtgtgcctggagttc
tcctcggtgatcgagagtaaacgtttcgactcgctgtataagcaaatcgatctggcaccg
gaagaattcaaaaagctggtcaatgaagaggtggaaaacaatgccgcgaccgataaagcg
ccatccactcatacttcaccggtcgtgcccgccaccactccgggaacaaaaccggatcta
aacgcttccttcgtgtcggctaacgcggaacagttttatcagtatcaacccactgaaatc
attctctctgaaggtcgactggtcgatagtcagggggatggtgttgttggtgtcaactat
tacaccaattccggccgtggtgtaaccggagaaaacggggaattttcctttagttggggg
gaaaccatctcctttggcatcgacacttttgagcttggttctgtgcgtggtaacaagtcg
actattgcattgactgaactgggtgatgaagttcgcggggcaaatatcgatcagttgatt
caccgctattcgaaggctggacaaaatcacacgcgtgtagttccggatgaagtgcgcaag
gtttttgctgaatatcccaacgtgattaacgagattatcaatctctcgttatccaatggt
gcgacgctgggggaaggtgagcaagtcgttaatctgcctaacgaatttatcgagcagttt
aagacgggtcaggccaaagagatcgataccgcgatttgtgcgaaaaccgatggttgtaac
gaggctcgctggttctcgctgacaacgcgcaatgttaatgacggccagattcagggcgtt
atcaacaagctgtggggcgtggatacgaactacaaatctgtcagtaagttccatgtattc
catgactctaccaacttctatggcagcacgggtaatgcgcgcggtcaggcggtggtgaat
atctccaacgcggccttcccgattctgatggcgcgtaatgataaaaactactggctggcg
tttggcgaaaaacgcgcctgggataaaaatgagctggcgtacattactgaagcgccttcc
attgtgcgaccagagaacgtgacacgcgaaaccgccaccttcaacctgccgtttatctcg
ctggggcaagtgggcgatggcaagctgatggttatcggtaacccacactacaacagcatc
ctgcgttgcccgaacggctacagctggaacgggggcgttaataaagacggacagtgtacg
ctcaacagcgacccggatgacatgaagaacttcatggagaacgtgctgcgctatctgtca
aatgatcgctggttgccggatgcaaaatccagtatgaccgtgggtactaacctggacacg
gtatatttcaaaaaacatggtcaggtgctgggaaatagcgcaccgtttgcgttccacaag
gatttcactggcatcacggtcaaaccaatgaccagctatggcaatctgaatccagatgaa
gttcctctgttgatcctcaatggctttgaatacgtcacacaatggggtagcgatccttac
tccattcctctgcgcgcagataccagcaaaccgaagctgacccagcaggatgtgaccgat
ttgatcgcctatatgaacaaaggtggatcggtgctgatcatggaaaacgtgatgagcaat
cttaaggaagagagcgcatctggctttgtacgtctgcttgatgccgcaggtttgtcgatg
gcgcttaacaagtcggtagtaaataacgatccgcaaggctaccctgaccgtgttcgtcaa
cgacgttcaacgccaatttgggtctatgagcgttatccggctgtcgatggtaaaccaccg
tataccattgatgacaccacgaaagaagttatctggaaatatcagcaagaaaacaaacct
gatgacaaaccgaagctggaagttgccagctggcaggaagaagttgagggtaaacaggta
acccaattcgcctttattgatgaagccgaccacaaaacgcctgagtcactggctgcggca
aaacagagaattctggacgcgttcccagggctggaagtgtgtaaggattctgactatcac
tatgaggtcaactgtctggaataccgcccaggcacgggtgtgccggtaaccggtggcatg
tatgttccgcagtatacgcagctggatcttggagctgacactgcgaaagcgatgctgcag
gctgcggatttaggcaccaatattcagcgcctgtatcagcatgagctttatttccgtacc
aatggcctccagggtgagcgtctcaacagcgttgatctggaacgtttataccaaaacatg
tccgtctggctgtggaacgagacgaaatatcgttatgaagagggtaaagaagacgagctg
ggctttaaaacgttcactgagtttctgaactgctacaccaacaatgcatacgttggcacg
cagtgttctgctgagctgaaaaaatcgctgatcgataacaagatgatttatggtgaagaa
agcagcaaagcgggcatgatgaacccgagctacccgctcaactatatggaaaaaccgctg
acacgcctgatgctgggccgttcctggtgggatctgaacatcaaagttgatgttgagaag
tatccgggagtggtgaatacaaacggcgaaaccgtcacacaaaacattaacttgtactca
gctccaaccaaatggtttgcaggtaacatgcagtcaactggcctgtgggcacctgcccag
caggaagtcagcattgagtcaaaggcgacagttcctgtgaccgtgactgttgcgctggcc
gacgacctgacaggacgagagaagcatgaagttagcctgaatcgtccacccagagtgaca
aaaacctatgacctgaaagccaatgataaggtgacgttcaaagtcccttacggtggtctg
atttacatcaagggcgacagcaaagaggtgcaatcagctgacttcacctttaccggtgta
gtaaaagcgccgttctataaagacggtaagtggcaacacgatctgaactcccctgccccg
ctgggcgaactggagtctgcctcgttcgtctataccacaccgaagaagaacctgaatgcc
agcaattacactggcggactggagcaattcgctaacgatctggatacctttgccagctcg
atgaatgacttctacggccgtgatagcgaagacggtaagcaccggatgtttacctataaa
aacttgccgggccacaaacatcgtttcgccaacgatgtgcagatctccatcggtgatgcg
cattcgggttatccggtaatgaacagcagcttctcgccgaacagcaccacgctgccgacg
acgccgctgaacgactggctgatctggcatgaagtcggtcataacgccgcagaaacgccg
ttgactgtaccgggtgcaactgaagtcgctaacaacgtgctggcgctgtacatgcaggat
cgttatctcggcaagatgaaccgtgtcgctgacgatattaccgtcgcaccggaatatctg
gaggaaagcaacggtcaggcatgggcgcgcggcggtgcgggtgaccgtctgctgatgtac
gcacagctgaaggaatgggcagagaaaaactttgatatcaagaaatggtatccagatggc
actcctctgccagagttttacagcgagcgtgaagggatgaaaggctggaacctgttccag
ttgatgcatcgtaaagcacgcggcgatgaggtcagcaatgacaagtttggcggcaagaat
tactgtgctgaatccaacggtaacgcagcggacacgctgatgctgtgtgcctcctgggtc
gcccagacggatctttcggagttctttaagaaatggaatccgggcgcgaatgcttaccag
ttgccgggagcgacggagatgagcttcgaaggcggtgtgagccagtcggcgtacaacacg
ctggcgtcactcaatctgccgaaaccgaagcaagggccggaaaccattaacaaggttacc
gagtattcgatgcctgctgaataa
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integrated database retrieval system