Escherichia coli 55989 (EAEC): EC55989_5019
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Entry
EC55989_5019 CDS
T00826
Symbol
yjjM
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eck03000
]
EC55989_5019 (yjjM)
Transcription factors [BR:
eck03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EC55989_5019 (yjjM)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
Rrf2
HTH_24
HTH_IclR
Phage_rep_O
HTH_11
HTH_36
HTH_5
HTH_28
CENP-B_N
HTH_DeoR
HTH_23
Sigma70_r4
TrmB
HTH_29
Mab-21_C
Motif
Other DBs
NCBI-ProteinID:
CAV02140
UniProt:
B7LE08
LinkDB
All DBs
Position
complement(5108253..5109167)
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AA seq
304 aa
AA seq
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MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQ
VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAG
VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD
HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF
HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT
RYAH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcacaaaatttacgccacaatgtgattaaccaggtcattgatgatatggcg
cggggtcatatcccttccccacttccatcgcaaagtgcgctggcggaaatgtacaacatc
agccgcactacagtgcgtcatattctcagccacttacgcgaatgcggcgtcttaacgcag
gttggaaacgactatgtgattgcgcgtaaacctgaccatgatgacggtttcgcctgtact
accgcttcaatgagtgaacaaaacaaagtgtttgagcaggcttttttcacgatgataaac
cagcgccagttacgccctggggaaactttttctgaactgcaactggctcgggccgcgggt
gtcagcccggttgtagtaagagaatatcttttaaaattcggccgttataatcttattcaa
agcgaaaagcgcggccagtggagcatgaagcaattcgatcaatcctacgccgagcagctg
tttgaactacgcgaaatgctcgaaacacattcacttcagcactttctcaacctgcctgat
catgatccccgctggctgcaggcgaaaaccatgctcgaacgtcatcggctactgcgtgac
aacatcggcaatagctttcgcatgttctcgcaacttgacagagattttcactccttactg
ctttcagctgccgacaatatcttttttgatcaatctcttgagatcatctcagtcatcttt
cattttcactatcaatgggacgaaagcgatcttaaacagcgcaatatcattgccgtcgat
gagcatatgaccattctcagcgctctgatttgccgcagtgaccttgatgccacccttgcg
ctccgtaaccatttgaattcagctaaacaatcaatgattcgatccattaatgagaacacg
cgttatgctcattaa
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