Escherichia coli ATCC 8739: EcolC_0460
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Entry
EcolC_0460 CDS
T00697
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ecl
Escherichia coli ATCC 8739
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecl03019
]
EcolC_0460
03009 Ribosome biogenesis [BR:
ecl03009
]
EcolC_0460
Messenger RNA biogenesis [BR:
ecl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EcolC_0460
Ribosome biogenesis [BR:
ecl03009
]
Prokaryotic type
rRNA processing factors
EcolC_0460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ACA76137
LinkDB
All DBs
Position
497902..499371
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA
ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE
ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttagtaaacgtaacgccttcggaaacgcgagtggcgtatattgat
ggcggtattctgcaggaaattcatattgaacgtgaggcgcgacgcggaatagtaggcaat
atctacaagggtcgtgtaagtcgtgtacttccgggtatgcaggcggcttttgtagatatt
gggctggataaagccgcgtttcttcatgcatccgacatcatgccgcacaccgaatgtgtg
gcgggtgaagaacaaaagcaattcacggtgcgcgacatctcggaactggttcgtcagggg
caagatctgatggtgcaggtggtgaaagatccgcttggcactaaaggtgcgcgcctgacc
accgatatcacgctcccttctcgctatctggtgtttatgccaggggcttctcacgttggg
gtttcccaacgtattgaaagcgaatcagaacgtgaacgcctgaaaaaagtggtcgcagag
tattgcgacgagcagggcgggtttatcatccgtaccgcagcggaaggggttggcgaggct
gaactggcctccgatgccgcttatctgaaacgcgtctggaccaaagttatggagcgtaaa
aaacgcccgcagacccgttatcagctgtacggcgaactggcgctggcgcagcgtgttctg
cgtgatttcgccgatgccgaactggaccgcattcgcgttgactcacgcctgacttacgaa
gcgttacttgagttcacctcggagtacattcccgagatgacaagcaagctggagcattac
acaggacgccagccgattttcgatctctttgatgtcgaaaacgaaatccagcgagcgctg
gaacgcaaagtagaactgaaatccggtggttatctcattatcgaccagaccgaagcgatg
accaccgtggacatcaataccggagcgtttgtcggtcatcgcaatctggacgacaccatt
ttcaataccaatattgaagcgacgcaggctatcgctcgccagttacggttgcgtaatctg
ggcgggattatcattattgatttcatcgatatgaataatgaagatcaccgccgccgagtg
ctgcactcgctggagcaggcgttgagcaaagaccgggtgaaaaccagcgttaatggtttt
tcggcgctggggctggtggagatgacgcgtaaacgcacccgcgaaagcattgagcacgta
ctgtgtaacgaatgcccaacctgccacggtcgcggaacggtgaaaaccgtggaaacggta
tgctatgaaatcatgcgcgagattgttcgtgtccaccatgcttacgactccgaccgtttc
ctggtctatgcttctccggcagtagctgaagccttgaaaggcgaagagtcacactcgctg
gcggaagtggaaattttcgttggcaaacaggttaaagtacaaattgaaccgctctataac
caggagcagtttgacgtcgtaatgatgtaa
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