Escherichia coli ATCC 8739: EcolC_1110
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Entry
EcolC_1110 CDS
T00697
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecl
Escherichia coli ATCC 8739
Pathway
ecl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EcolC_1110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecl03019
]
EcolC_1110
03009 Ribosome biogenesis [BR:
ecl03009
]
EcolC_1110
03036 Chromosome and associated proteins [BR:
ecl03036
]
EcolC_1110
Enzymes [BR:
ecl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EcolC_1110
Messenger RNA biogenesis [BR:
ecl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EcolC_1110
Ribosome biogenesis [BR:
ecl03009
]
Eukaryotic type
90S particles
RNase
EcolC_1110
Prokaryotic type
rRNA processing factors
EcolC_1110
Chromosome and associated proteins [BR:
ecl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EcolC_1110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ACA76777
UniProt:
B1IVR0
LinkDB
All DBs
Position
1208860..1209540
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagtaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtttggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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