Escherichia coli ATCC 8739: EcolC_2339
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Entry
EcolC_2339 CDS
T00697
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ecl
Escherichia coli ATCC 8739
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecl03016
]
EcolC_2339
Enzymes [BR:
ecl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EcolC_2339
Transfer RNA biogenesis [BR:
ecl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EcolC_2339
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
ACA77974
UniProt:
B1ITG7
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All DBs
Position
2577719..2579653
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNH
EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSK
LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEF
FAATIESKAKLVYDQVSDWLENTGDWKPESEAIAEQVRLLAQICQRRGEWRHNHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD
PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgcgctgaaggggtggtaaaagccacagaaaaaggctttggcttcctggaagtcgacgcg
caaaaaagttatttcattccgccgccgcagatgaaaaaagtcatgcatggcgaccgaatt
atcgcggtgatccacagtgaaaaagaacgtgaatccgcagagccagaagaactggttgaa
ccgttcctgactcgtttcgtgggtaaagttcagggcaaaaatgaccgtctggccatcgtt
cctgatcatccactcttaaaagacgccattccttgccgcgcagcccgtggcctgaaccac
gagtttaaagaaggcgactgggcggttgccgaaatgcgccgtcatccgctgaaaggcgat
cgttctttctatgcagaactgacacaatacatcacttttggtgacgaccactttgtaccg
tggtgggttacccttgcgcgccataatctggaaaaagaagcaccagacggcgtcgctacc
gaaatgctcgatgaaggtctggttcgtgaagatctgaccgcgctggattttgtcaccatc
gacagtgccagcacagaagatatggatgacgcccttttcgctaaggcgttgccggatgac
aaacttcagctgattgtggcgattgccgatccaaccgcgtggattgctgaaggcagcaag
ctggacaaagccgcgaaaattcgcgcattcaccaactatctgcctggcttcaacatccct
atgctgcctcgcgagctttctgacgatctctgctcactgcgcgccaatgaagtccgcccg
gtactggcatgccgcatgacgctctccgctgatggcaccattgaagataatatcgaattc
tttgccgccaccatcgaatccaaagcgaagctggtgtatgaccaggtttctgactggctg
gaaaataccggtgactggaagcctgaaagtgaagcaattgccgaacaagtccgtttgtta
gcgcaaatttgccaacgccgcggcgagtggcgtcataaccacgcactggtgtttaaagat
cgcccggattaccgctttattctcggtgaaaaaggtgaagtgctggatatcgtcgccgag
cctcgtcgcattgccaaccgtatcgtcgaagaagcgatgattgccgctaacatttgtgcg
gcccgcgtactgcgcgataagctcggttttggcatctataacgtgcatatgggctttgat
ccggcgaatgccgacgcgctggcagcgttgctgaaaacgcacggtctgcatgtcgatgcc
gaagaagtgctcacgctggacggtttctgcaaactgcgtcgtgaactggatgcgcaacca
actggtttcctcgacagccgcattcgtcgcttccagtcatttgctgaaattagcactgaa
cccggtcctcactttggcctcggtctggaagcatacgccacctggacatcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaagcggttatcaaaggcgaaactgcg
acgcgtccacaggatgagatcactgtccaaatggccgagcgtcgccgtctcaatcggatg
gcagaacgtgatgttggtgactggttatacgcacgcttcctgaaagacaaagccgggacc
gacacccgtttcgcggcggaaattgtcgatatcagccgtggcggcatgcgtgttcgtttg
gttgataacggcgctatcgcctttattcctgcacctttcttacacgctgtgcgcgatgaa
atggtttgcagccaggaaaacggcaccgtacaaattaaaggtgaaacggtttataaagta
actgacgttattgacgtcaccattgccgaagtccgcatggaaacccgcagcattattgcg
cgcccggtcgcgtaa
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