Escherichia coli ATCC 8739: EcolC_2947
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Entry
EcolC_2947 CDS
T00697
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ecl
Escherichia coli ATCC 8739
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecl03400
]
EcolC_2947
Enzymes [BR:
ecl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EcolC_2947
DNA repair and recombination proteins [BR:
ecl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EcolC_2947
Prokaryotic type
EcolC_2947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACA78574
LinkDB
All DBs
Position
complement(3214192..3215610)
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AA seq
472 aa
AA seq
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MITHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHCPFIA
WTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRRWL
PELRDVPGKAVHEPWKWAQKAGVMLDYPQPIVDHKEARLRTLAAYEEARKGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgattacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgttatatatcgctacaccacgc
cagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttacccacctg
ttttataactatcagtatgaagtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggtaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgtgtcgctgcgccaaaagttcgtagtagcggatcg
atagagcccgcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtggaaggcaccagtcgtttgtccgcc
agcctggcaacgggcgggttatcgcctcgccagtgtttgcatcgcttgttggcggaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttagtgagctgatctggcgcgag
ttctaccgtcatctgatgacgtattacccctcgttgtgtaaacattgtccgtttattgcc
tggacggatcgtgtgcagtggcagagcaatcccgcacatttacaggcctggcaggaaggc
aaaacgggatacccgattgtcgatgctgccatgcgtcagcttaacagcactggctggatg
cataaccggctacggatgattacggccagttttctggttaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagccaataac
ggtggctggcagtgggccgcttcaaccggaaccgatgcagcgccgtattttcgtattttc
aacccgacaacccagggcgagaaatttgaccgtgagggcgagtttattcgtcgatggtta
ccggagctgcgcgatgtaccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgatgctggattatccgcaaccgatagttgatcacaaagaggcaaggctgcga
acgctggcagcgtacgaagaagcgaggaaaggagcctga
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