Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_00985
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Entry
ECNIH3_00985 CDS
T03350
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH3_00985 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecla03021
]
ECNIH3_00985 (rho)
03019 Messenger RNA biogenesis [BR:
ecla03019
]
ECNIH3_00985 (rho)
Transcription machinery [BR:
ecla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ECNIH3_00985 (rho)
Messenger RNA biogenesis [BR:
ecla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECNIH3_00985 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIN20934
LinkDB
All DBs
Position
201742..203001
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggactggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
caacacgctaagagtggcgaagatatctttggcgacggtgtgctggagatactgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctccaaaagagggtgaacgctactttgcgctgttgaaggttaatgaagtcaac
tacgacaaaccggaaaactcccgcaataagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgtctgcgtatggagcgtggtaacgggtctactgaagacttaaccgctcgt
gtgctggatctggcatcgccaattggtcgtggccagcgtggtctgattgtggcgccgcca
aaagccggtaaaaccatgctgctgcaaaacatcgcgcagagcattgcttacaaccatcca
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggggaagtggttgcgtcaaccttcgacgagcctgcttcccgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgattccattacccgtctggcgcgtgcctacaacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggctccaaaatggacgaagttatttacgaagagtttaaaggtacaggcaac
atggaactgcacctttctcgtaaaatcgcagaaaaacgcgtcttcccggcgatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggcgaaatcgacgcaatggaattcctcatt
aacaaactggcgatgactaaaacgaacgacgatttcttcgacatgatgaaacgctcgtaa
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