Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_03930
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Entry
ECNIH3_03930 CDS
T03350
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH3_03930 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecla03019
]
ECNIH3_03930 (pcnB)
Enzymes [BR:
ecla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECNIH3_03930 (pcnB)
Messenger RNA biogenesis [BR:
ecla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECNIH3_03930 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AIN21486
LinkDB
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Position
complement(834182..835606)
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AA seq
474 aa
AA seq
DB search
MTKHTTRCTIFTRVANFCRKVLSREESMANDAIAQPHMSVIPREQHNISRKDISENALKV
LYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHV
MFGPEIIEVATFRGHHEAGVNDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYS
VADFTVRDYVGGMQDLKDGLIRLIGTPETRYREDPVRMLRAVRFAAKLNMRISPETAEPI
PRLATLINDVPPARLFEESLKLLQAGYGFETYNLLREYNLFQPLFPTITRYFTENGDSAM
ERMIAQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQRITQESGLAYYDAFALAAND
VLDEGCRTLAIPKRITTLVRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLSLRAEVE
RNQELQRLAQWWGEFQVSAPPEQKDMLTDLDDEPAPRRRHRRPRKRAPRREGTA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ataacaaaacacactacgaggtgtactatttttacccgagtcgctaatttttgccgtaaa
gtgctgagccgcgaagagagcatggcgaatgatgctattgcacagccacacatgtcggtc
attccgcgtgagcagcacaatatttcccgcaaagatatcagtgaaaatgccctcaaggtg
ctctatcgtctgaataaagcaggctacgaggcctatctcgtcggcggcggggtgcgcgat
ttactgctgggcaaaaaaccaaaagatttcgacgtgacgaccagcgccacgcctgaacag
gtgcgtaaattattccgcaactgccgtctggttggtcgccgtttccgtctggcgcacgtg
atgtttggaccagaaattattgaagtggcgaccttccgcggtcaccacgaagcgggcgtc
aacgatcgcacaacttcccagcgcggccaaaacggcatgctgctgcgcgacaacatcttc
ggctctattgaagaagatgctcagcgtcgcgatttcaccatcaacagcctttactacagc
gtggcggattttaccgtgcgcgattacgtcggcggtatgcaggatctgaaagacggcctg
attcgcctgatcggcacgccggaaacgcgctatcgcgaagatccggtccggatgctgcgc
gccgtgcgtttcgccgccaagctaaacatgcgtatcagcccggaaaccgcagagccgatc
ccgcgcctggcgacgctgattaacgacgtcccccctgcccgtctgtttgaggagtcgtta
aagctgctccaggcaggctacgggtttgaaacctacaatttgctgcgtgaatacaacctg
ttccagccgctgttcccgaccattacccgctacttcaccgaaaacggtgacagcgcaatg
gagcggatgattgcacaggtgctgaagaacacggatacccgtattcataacgatatgcgc
gtgaatccggcgttcctgttcgcggccatgttctggtatccgctgctggaaacggcgcag
cgcattacccaggagagcggcctcgcctattatgatgcgttcgcgctggcggcaaacgac
gtgctggacgaaggctgtcgcacgctggcgatcccgaaacgtattaccacgctggtgcgt
gatatctggcagcttcagctgcgtatgtcccgccgtcagggtaaacgtgcctggaaactg
atggagcatcctaagttccgcgccgcgttcgatttactctctctgcgtgctgaagtcgaa
agaaaccaggagctacagcgcctggcgcagtggtggggagaatttcaggtctctgcacca
ccggagcaaaaagatatgctcacggatctcgatgacgagccggcaccgcgccgtcgtcac
cgtcgcccgcgcaagcgcgcgccgcgtcgtgaaggcacagcatga
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