Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_04125
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Entry
ECNIH3_04125 CDS
T03350
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03030
DNA replication
ecla03430
Mismatch repair
ecla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECNIH3_04125 (dnaE)
03430 Mismatch repair
ECNIH3_04125 (dnaE)
03440 Homologous recombination
ECNIH3_04125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecla03032
]
ECNIH3_04125 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecla03400
]
ECNIH3_04125 (dnaE)
Enzymes [BR:
ecla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECNIH3_04125 (dnaE)
DNA replication proteins [BR:
ecla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECNIH3_04125 (dnaE)
DNA repair and recombination proteins [BR:
ecla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECNIH3_04125 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIN21524
LinkDB
All DBs
Position
880191..883673
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GLKPIVGADFHVQSDLLGDEMTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNNALVDQCVSFYEEHFPDRYYLELIRTGRADEES
YLHAAVALAEARGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDEAVRKEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcaaagaccgggccgctggtaaagaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcatggcgca
ggattaaagcccatcgtcggcgcggatttccacgtgcagagcgacctgctcggcgatgag
atgacgcaaatttccgtgttagccatgaataacacgggctatcagaacctcactctgctg
atctcaaaagcctaccagcgcggctacggcgcgctgggtccatggattgaccgcgactgg
ctggcggagctgaacgaaggtctgctgctgatctccggtggtcgtatgggggatgtcggc
aaatgtctgctgcgcgggaacaacgcgctggtggatcagtgcgtctcgttctacgaagag
catttcccggatcgctattacctggagctaatccgtaccgggcgtgcggatgaagagagc
tatctgcatgcggccgtcgccctggcggaagcgcgtggcctgcctgtggtagccaccaac
gatgtgcgcttccttgagccgggcgattttgacgcacatgaaattcgcgtcgctatccac
gacggcttcaccctcgacgatccgaaacgtccacgcaactactcatcgcagcagtacatg
cgcagcgaagaggaaatgtgtgagctcttctccgacatcccggaagcgctggaaaacagc
gtagagattgccaagcgctgcaacgtcaccgtgcgtctcggcgaatatttcctgccgcag
ttcccgacgggcgacatgaccacggaagatttcctggtcatgaaatcgaaagagggcctt
gaagagcgtctggaattcctcttcccggatgaagcggtccgtaaagagaagcgtcctgaa
tatgacgagcgtctggatattgaactccaggtgatcaaccagatggggttccctggctac
ttcctgatcgtaatggagttcatccagtggtcgaaggataacggcgtaccggttggcccg
ggccgtggttcaggtgccggctcgctggtggcgtatgcgctgaaaatcaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttcctcaacccggaacgtgtctccatgccc
gactttgacgtcgacttctgcatggaaaaacgcgaccaggtgattgagcacgtggccgat
atgtacggtcgtgatgcggtttcacagatcattaccttcggtacgatggcggcgaaagcg
gttatccgcgatgtgggccgcgttctgggccacccctacggttttgtcgatcgaatctct
aagctggtgccgcccgatccgggcatgaccctggcgaaagcctttgaagctgaacctcag
ctgccggaaatctacgaagccgacgaagaggtgaaagcgctgatcgacatggcgcgcaag
ctggagggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttattgccccgacc
aaaatcaccgacttcgcgccgctgtactgcgatgaagcgggccagcatccggtcacccag
ttcgacaagaacgacgttgaatacgccgggcttgtgaagttcgacttccttggtttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgccgtgagaagaacggc
gagccgccgctggatatcgcggctatcccgcttgatgacaagaaaagtttcgacatgctg
caacgctccgagacgacagccgtcttccagcttgaatcccgcggcatgaaagatttgatt
aagcgtctgcaaccagactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
ggcccgttgcagtcggggatggtagataactttatcgaccgtaagcacgggcgcgaagag
atttcctatccggatgtgcagtggcagcatgaaagcctgaagccggtactggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctttctggttac
acccttggcggcgcagatatgttgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttctatctttgaagatggggcgaagaaaaacggcgtcgatggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatcccac
tccgccgcttatgctttggtgtcgtatcaaacgctgtggctcaaggcccactatcccgct
gagtttatggcggcggtaatgaccgccgatatggacaacaccgaaaaggtggttggcctg
gtggacgagtgctggcgcatggggctgaagatcctgccgccggatattaactcgggcctg
taccatttccacgtcaacgatgacggggaaatcgtctatgggatcggcgcgatcaagggc
gtgggtgaggggccgatcgaggcgatcatcgaagcgcgtaacaacggcggctatttccgc
gagctgttcgacctgtgcgcccgcaccgataccaaaaaactgaaccggcgcgtgctggaa
aaactgatcatgtccggtgcgtttgaccggctggggccacaccgcgccgcgctgatgaac
tcgctcggcgatgcgctgaaagcggccgatcagcatgctaaagcggaagccattggtcag
gcggatatgttcggtgtgctggcggaagagccagagcagatcgagcagtcctattccaac
tgccagccctggccagaacaggtggtgctggatggggagcgtgagacgttaggcctgtac
ctgacgggacacccgatcaaccagtatctgaaagaaattgagcgctatgtcggcggccac
aggcttaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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