Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_10235
Help
Entry
ECNIH3_10235 CDS
T03350
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecla03019
]
ECNIH3_10235
Enzymes [BR:
ecla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ECNIH3_10235
Messenger RNA biogenesis [BR:
ecla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECNIH3_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
ResIII
AAA_16
NTPase_1
PhoH
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIN22675
LinkDB
All DBs
Position
2148951..2152853
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLSFPVLMQQLDSLMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPEITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIADELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGTESSGDILIFMSGE
REIRDTADALCKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERGQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKASKETPDLLNFEKSMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDRDDW
NWDQVPDHLKITFRVVDDKNKKLLEGRSLTELKEALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEGFAQLHEK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAVDPHRDRAQMLKVENVQQAWQQWLNKLPPARRDDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacagaaattatccttcccggtgctgatgcaacagcttgattcgctgatg
ctgcgcgataaacagcggtttgcgcgccgtctgcacggtgttaagaaggttaaaaatcct
gatgcacaacaggccatctaccaggagatggccaaagagattgaacaggcggcagggaaa
gttgtgctgcgtgaagccgcacgcccggagattacctatccggaaaacctgcccgtcagc
cagaaaaaacaggacattcttgaggccgtgcgcgaccaccaggtggtgatcgtcgcgggg
gaaaccggttcaggtaaaaccactcagctgccgaagatctgcatggaattaggccgcggg
gtgaaagggttgatcggtcacacccagccgcgtcgtctggcggcgcgcaccgtggcgaac
cgtattgccgacgagctgcaaacggagccgggcggctgcatcggctacaaggtgcgattc
agcgaccacgtcagcgataacaccatggttaagctgatgaccgacggtatcctgctggcg
gaaatccagcaggatcgtctgctgatgcagtacgacaccatcatcatcgatgaagcgcac
gagcgcagcctgaacattgacttcctgctcggctacctgaaagagctgctgccccggcgt
ccggatctgaaaatcatcatcacctccgcgaccatcgacccggagcgcttctcaaaacat
ttcaataatgcgccgatcattgaagtctcaggccgaacctacccggttgaagtgcgctat
cgcccgattgtagaagaggcggacgataccgagcgcgaccagcttcaggccatcttcgat
gccgtcgacgagctgggcaccgagagttctggcgacattctgatcttcatgagcggcgag
cgtgagatccgcgataccgccgatgcgctctgcaagcgcgatctgcgccataccgagatc
ctgccgctgtacgcgcgcctgtccaacagcgagcagaaccgcgtgttccagccgcacagc
gggcgccgcatcgtgctggcgaccaacgtggccgaaacctcgctgaccgtaccgggcatt
aaatacgtgatcgacccgggtacggcgcgcatcagccgctacagctaccgaaccaaagtt
cagcgtctgccgatcgagccggtttcgcaggcgtcagctaatcagcgtaagggccgctgc
ggccgcgtgtcggaagggatctgtattcgtctctattcggaagacgatttcctgtcgcgc
ccggagtttaccgatccggagatcctgcgaaccaacctggcatccgttatcctgcaaatg
accgcgctggggctgggcgatatcgccgccttcccgtttgtggaagcgccggataagcgc
aatattcaggacggggtgcggctgctggaagagctgggtgccattaccaccgacgagcag
gcgacggcctacaagctaacgccgctgggccgccagcttagccaactgccggtcgacccg
cgtctggcgcgcatggtgctggaggcgcaaaaacacggctgcgtgcgcgaggcgatgatc
atcacctcggcgctctccattcaggatccgcgcgagcgtccgatggacaaacagcaggcg
tcggatgaaaaacaccgtcgcttccacgataaagagtccgatttcctcgcattcgtcaac
ctgtggaattacctcggcgagcagcaaaaagcgctctcttcgaatcagttccgccgtcag
tgccgggtggatttcctcaactacctgcgcgtgcgcgaatggcaggatatctacacccaa
ctgcgtcaggtggtgaaagagctgggcatcccggtgaacagtgaaccggcggagtaccgc
gaaattcatatcgccctgctgaccggcctgctgtctcatatcgggatgaaggatgcggat
aaacaggaatttaccggcgcacgcaacgcgcgtttctccatcttcccgggctccggtttg
ttcaagaagccgccgaagtggaccatggtcgccgagctggtggaaaccagccgtctgtgg
gggcgtatcgccgcgcgtatcgatccagagtgggttgagccggtggcgcagcacctgctg
aaacgctcgtacagtgagccgcactgggagcgcgggcagggcgcggtgatggcgacggaa
aaagtcaccgtttacggcctgccggtggttgcagcgcgtaaggttaactacagccagatt
gacccggcgctgagtcgcgagctgtttatccgccatgcgctggtggaaggcgactggcag
acgcgccatgcgttcttccgcgaaaacctcaagctgcgcgccgaggtggaagagcttgag
cacaagtcccgccgccgcgacattctggtggacgacgagacgctgtttgagttttacgac
cagcgcatcagccacgatgtgatctcggcgcgccatttcgacagctggtggaagaaagcc
agcaaagagaccccggacctgctcaactttgaaaagagcatgctgatcaaagagggcgcg
gagtcggtcagcaagctcgactacccgaatttctggcatcagggcaacctgaagctgcgt
ctgacctatcagtttgagccgggcgcggatgccgatggcgtgacggtgcacattccgctg
ccgctgttaaaccaggtggatgagagcgggtttgagtggcaaattcccggcctgcgccgc
gagcttgtcattgcattaatcaaatccctgcctaaaccagtgcggcgcaactttgtaccg
gcgccgaactacgccgaagcgtttttaggccgcgtcacgccgctggaactgccgctgctg
gacgcactggagcgtgagttccgacgcatgaccgggaccaccattgaccgcgacgactgg
aactgggatcaggtgcccgatcacctgaaaatcacattccgcgtagtggacgataaaaac
aaaaagctgctcgaaggccgttctctgacggagctgaaagaagcgctgaaaggtaaagtc
caggagacactctctgcggtggccgatgacggtattgagcagagcgggctgcacatctgg
agctttggtcagcttccggaaagctatgagcagaagcgcgggaactacaaggtgaaagcc
tggcccgcgctggtggatgagcgcgacagcgtggcgattaagctctttgacaatccgcag
gagcaacagcagatgatgtggcgcgggctgcgtcgcctgctgctgcttaacatcccgtcg
ccgattaagtatctgcacgagaagctgccgaacaaagccaagctggggctctactttaac
ccgtacggtaaggtgctggatctgatcgacgactgcatctcctgcggtgtggacaaactg
atccacgaggcgggcggtccggtctggacggaagagggctttgctcagcttcatgaaaag
gtgcgcgcggagctgaacgacaccgtggtggagattgccaaacaggtcgagcagatcctc
accgccgtgttcaatatcaacaagcggctgaaggggcgggtggatatgaccatggccctg
ggtctgtcggacgtgaaggcgcagatggcggggctggtgtatcgcggctttgtcaccggc
aacggctttaagcgtctgggtgatacgctgcgttatttgcaggcgattgagaagcgtctg
gagaaaatggcggtcgatccgcatcgcgatcgagcgcagatgctgaaagtcgaaaacgtg
cagcaggcgtggcagcagtggctcaacaaactgccgccagcgcgtcgcgatgatgacgac
gtgcgggagatccgctggatgatcgaggaactgcgcgtcagcttcttcgcccagcagctc
ggtacgccgtatcccatttcggataagcgtatcttgcaggcgatggagcagatctccggc
taa
DBGET
integrated database retrieval system
