Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_16190
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Entry
ECNIH3_16190 CDS
T03350
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecla03009
]
ECNIH3_16190
Enzymes [BR:
ecla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECNIH3_16190
Ribosome biogenesis [BR:
ecla03009
]
Prokaryotic type
rRNA helicases
ECNIH3_16190
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_22
AAA_11
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIN23793
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All DBs
Position
3441158..3442486
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEEATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
QKIGRYVDEPLKARVIDELRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgctcttgag
agtaaaggctttacacgcccgaccgccattcaggccgcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctacttgctg
cctgtgttgcagcatttgctcgattttccgcgtaaaaaatcagggccgccgcgcattttg
atcctgaccccgacccgtgaactggcgatgcaggttgccgaacacgcgcgtgagctggcg
gcgaacacccatctggatatcgcgaccatcaccggcggcgtagcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgttgtcgcgacgacaggccgtctgctgcaatac
ataaaagaagagaacttcgactgccgggcggtggaaacgctgattctcgatgaagctgac
cgcatgctggacatgggctttgcccaggatatcgaacacatcgcgggtgaaacgcgctgg
cgtaaccagacaatgctgttctcggcaacccttgaaggggatgccattaaagatttcgcc
gaacgtctgctggaagatccggtggaagtgtccgctacgccatcgacgcgtgagcgtaag
aagatccaccagtggtactaccgcgcagataaccttgagcataaggttgagttgctgaaa
catctgctgaagcaggaagaagcaacccgtaccatcgtcttcgtacgtaaacgcgagcgc
gtgcatgagctggcagaaatgctgcgcaacgctggcatcaacaactgctatctcgaaggt
gaaatggcacaggttaagcgtaccgaagggattaagcgcctgaccgatggtcgcgtgaat
gtgctggttgcaaccgacgttgccgcgcgcgggatcgacatcccggacgtgagccatgtg
atcaactttgatatgccgcgcagcggtgatacttacctgcaccgtattggtcgtaccggc
cgtgcgggccgcaaagggattgctatttctctggtagaagcgcacgaccatctgctgctc
caaaaaattggccgctacgttgatgagccgctaaaagctcgtgtgattgacgaacttcgt
ccgacgacacgtgcaccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaagccgcgcgtgaagcagcgccaccgc
gataccaaaaatattggtaagcgccgtaagccaagttctgctgcgccagagacaaaaact
gaagagtaa
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