Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_18435
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Entry
ECNIH3_18435 CDS
T03350
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECNIH3_18435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecla03400
]
ECNIH3_18435
DNA repair and recombination proteins [BR:
ecla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECNIH3_18435
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECNIH3_18435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
DnaJ_CXXCXGXG
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_25
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIN24209
LinkDB
All DBs
Position
3891088..3893709
Genome browser
AA seq
873 aa
AA seq
DB search
MLTDDNNSVVIRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGASNARSSVGSVTTLSSLVRMMYSRA
GAYPAGQPMLYAEDFSPNTPQGACPSCHGLGHIYEVTETLMVPDPSLSIREKAIASWPPA
WHGQNLRDILVTLGYDIDTPWKNLPAEDRQWILFTEDTPTVPVFPGLSPEDTREAVRKKM
TPGYMGTFTGARRYVLHTFASTQSALMRKRVSRFMEGKLCPVCHGKRLKSESLSVTFAGV
DIGEFMQMPLDQLAELLLPISRGDFSAHHAGADADRDITRRDLTERAASGKAVHSDNADV
CRTSALSEEKRLAAQRLTGGVMARLYQLQKLGLGYLTLDRATPTLSAGELQRLRLATQLS
SMLFGVVYVLDEPSAGLHPSDSKALYDALENLRDAGNSVFVVEHDLNLMRRAQWLVDVGP
SAGEQGGHVLYSGIPEDLKAVTQSRTARYLFDEVRPPQSFARIPSGWLKLQGIHRHNLKW
IDVDIPLGVLTAVTGVSGSGKSSLIAQALPELVLSSLGGEPEDVLSEASDAEGPSVTEKT
YGTLTGDTGLVKRLVQVDQKPIGRTPRSNLATYTGLFDPVRKLFAGTTDAKLHHYDAGQF
SFNVAKGRCATCEGEGFVSVELLFMPSVYAPCPTCHGARYNRDTLRICWQDKNIAEVLHM
TVDEASQFFATEEPVARPLRLLSEIGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGH
TLYILDEPTTGLHASDADRLLVQLQRLVDAENTVIMIEHDMRAVTQADQVIDIGPGAGHE
GGRLVAAGTPEQVSQVKESRTAQYIARELSRNG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atcctgactgacgacaacaattcagttgtgattcgcggtgctcgcgagaacaaccttaaa
gaggtggatgtttccattccgcgcaacgcattggttgttttttcgggtgtgtcaggctcg
ggtaagtcttcactggcctttggcaccatttatgctgaggcgcaacggcgctactttgaa
tcggttgccccctacgctcgtcgcctcattgatcaggtcggggttccggatgtggatgcc
attgacggactgccgccagccgttgcgcttcagcaacaacgcggtgccagtaacgcgcgc
tcctctgtcggcagcgtgaccaccttatccagtctggtgcgaatgatgtactcacgggcg
ggcgcttatcctgccggacaaccgatgctgtatgccgaggatttttctcccaacacgccg
cagggggcatgcccttcttgccatggtctgggccatatctatgaggtaactgaaacactg
atggtgcccgatccctcacttagtatccgtgaaaaggctattgcttcctggcccccggcc
tggcacggacagaatctgcgggatattctggtgacgctggggtatgacatcgacactccc
tggaaaaatctgccagcggaagaccgtcagtggatcctttttaccgaagacacccccact
gtaccggttttcccgggactgagtccggaagatacgcgcgaagccgtcaggaaaaaaatg
acgccgggttatatggggaccttcaccggggcacgtcgttatgtgctacataccttcgcc
agcacgcaaagcgcgttgatgagaaaacgagtctcccgttttatggaaggcaagctgtgt
ccggtctgtcacgggaaaagactgaagtcagaatcattgtccgtcacctttgccggtgtg
gacattggtgaatttatgcagatgcccttagaccagctggcggaattgctccttccaatc
tcccggggggatttcagtgcccaccacgccggcgcagatgccgacagggatatcacccgt
cgggatctgacagagcgtgctgcatccggaaaagcggtccattccgataacgccgatgtc
tgccggacatcggcgttatcggaagagaaacgactggcggcacaacggctgaccggtggt
gtcatggcccggttgtatcagttgcagaagctggggctgggttatcttacgctggacaga
gcaaccccaactctatctgcaggagagcttcagcgactgcgtcttgccacgcaactcagt
tcgatgctgtttggtgtggtctatgttcttgatgaaccgtctgcgggtctgcacccctca
gacagtaaagcgctttacgatgcgcttgagaaccttcgtgatgccggcaactcggtgttt
gtcgttgaacatgatcttaacctgatgcgacgggcgcaatggcttgttgatgtgggaccg
tcggctggtgaacagggaggacatgttctctacagtggtattcctgaagatctgaaagcc
gtcacccaatctcgtaccgcgcgttatttatttgatgaagtccggccaccacaatctttt
gcccgtatcccatccgggtggctgaaactgcaggggatccatcgccacaatcttaagtgg
atcgatgttgatattcctctgggtgtgctgacagccgtgacgggagtctctggctccggt
aaatccagtctgattgcccaggccttaccggaactggtgctttcttcacttggcggtgag
ccagaagacgtgctttccgaagccagcgacgctgaggggccatccgtaacggagaaaacg
tacggtaccctgaccggtgataccggactggtaaagcgtctggttcaggttgaccagaaa
ccgataggcaggaccccccgttcaaacctggcgacatataccgggttgtttgatcctgtt
cgtaagctctttgccggaacgactgacgccaaactccatcattacgatgcgggtcaattc
tctttcaatgtggcaaaaggccgctgtgcaacctgtgaaggtgaaggattcgtcagcgtg
gagctgttgtttatgccgagcgtgtatgcaccgtgcccgacctgccatggcgcgcggtat
aaccgggatactctcaggatctgctggcaggacaaaaatatcgcggaggtcctgcatatg
acggtggatgaagccagtcagttctttgcgactgaagaaccagtggctcgtcccctccgt
ctgctgagtgaaattggtctgggctacctgcgtctgggacaaccagcaaccgagttatcc
ggaggggaggcgcaaaggatcaagctggcaaccgaactacaacgtagccaacgtggccac
acgttgtatatcctagatgaaccgacaaccggcctgcatgcttcagacgccgaccgcctc
cttgtgcagctgcagcggcttgttgatgcagaaaatacggtgataatgattgaacacgat
atgcgggcggttactcaggcagaccaggttatcgacatcggtcctggagcgggacatgag
ggaggacgcctggttgccgcaggaactcccgaacaggtatcgcaggtcaaagaaagccgt
accgcacagtatattgccagggaactctcacggaacggttaa
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