Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_18820
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Entry
ECNIH3_18820 CDS
T03350
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECNIH3_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecla03400
]
ECNIH3_18820
Enzymes [BR:
ecla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
ECNIH3_18820
DNA repair and recombination proteins [BR:
ecla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECNIH3_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SP2
Motif
Other DBs
NCBI-ProteinID:
AIN24280
LinkDB
All DBs
Position
complement(3975397..3975903)
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AA seq
168 aa
AA seq
DB search
MINDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIHQAGFTDKQLKPEEEQQLL
DTRCGITMLVERPTVQASEVNLHELRTGGRELVKKIEDYQPAALAILGKQAYEQAFSQRG
AKWGKQNITIGVTQVWVLPNPSGLNRATLDKLVEAYRELDEALVVRGL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgatattctggcccctggcctgcgggtggtgttctgcggaatcaacccgggc
aagtcctcggcgcacaccggttttcactttgctcatccgggaaatcgcttctggaaggtg
atccaccaggccggttttaccgacaaacagcttaagccggaagaagagcagcagctgctg
gatacgcgctgtggcatcaccatgctggtcgagcgtccaacggtgcaggcgagcgaagta
aatctgcatgagctgcgtactggcgggcgggaactggtgaagaagattgaagactaccag
cccgcggcgctggcgatcctcggcaagcaggcctacgagcaggcgttcagccagcgcggt
gcgaagtggggtaagcagaacattaccattggcgtaacgcaggtttgggtgttgccgaat
ccgagcgggctgaacagggcgacgctggacaagctggtggaggcgtatcgggaacttgat
gaggcgctggtggtgagggggctttag
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