Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_19315
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Entry
ECNIH3_19315 CDS
T03350
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH3_19315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecla03019
]
ECNIH3_19315
03009 Ribosome biogenesis [BR:
ecla03009
]
ECNIH3_19315
Enzymes [BR:
ecla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECNIH3_19315
Messenger RNA biogenesis [BR:
ecla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECNIH3_19315
Ribosome biogenesis [BR:
ecla03009
]
Prokaryotic type
rRNA helicases
ECNIH3_19315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIN24375
LinkDB
All DBs
Position
complement(4075775..4077670)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRSDRGGERRGGGRSFGGERREGGRSEGR
TGEPRRFSGERRENRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagaccggtagcggtaaaaccgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggacctctctaagctgagcggcctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccagaagcgatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgtattcagtccagcgtgaccactcgcccggacatc
agccagagctactggtctgtatacggcatgcgcaaaaacgaagcgctggtccgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtacgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtagcggctataacagcgcagcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtaaactac
gatatcccaatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcgggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagcggaactgccaaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcccagatccagcctgtcgctgaaggcgaagagctggat
atggaaactctggccgcagcactgctgaaaatggcgcagggcgaacgtagcctgatcgtg
ccacctgatgcaccgatgcgtcctaagcgtgagttccgtgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgtaacgaccgtggtccacgcggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgcgagcgtcgtgacgctggcgaaatggaactgtatcgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcacatcgttggcgcgatcgctaatgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcggttcacactcaacgatcgagctg
ccaaaaggcatgccgggcgaagtactgcagcactttactcgcacccgcattctgaacaag
ccaatgaacatgcaactgatgggtgatgcacagcctcgctctgaccgcggtggcgaacgc
cgtggcggtggtcgcagcttcggtggcgagcgtcgtgaaggcggtcgtagcgaaggtcgc
actggcgaacctcgtcgtttctccggcgagcgccgtgaaaatcgtggcccacgccgcgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
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integrated database retrieval system
