Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_19785
Help
Entry
ECNIH3_19785 CDS
T03350
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecla03019
]
ECNIH3_19785
Messenger RNA biogenesis [BR:
ecla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECNIH3_19785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
AIN24466
LinkDB
All DBs
Position
complement(4176842..4178782)
Genome browser
AA seq
646 aa
AA seq
DB search
MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLITTSFPA
LSRELDELMVPVDIVQIDIKQGKQTVFSHTRQGSYRPAGTVDQYRDITVRSLKHPGMTIH
LMYQDPMSNYLRSLMTTAPLTIAVALIVLLIFLAVRWQRRQLSGQELLETRSVRILNGER
GPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
IKNGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRSVVRLINALG
ARVAVTQAGLTLVSTSWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV
FAAGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcttttatcaccttgctgacgggactgaccatattt
gtcacgctaatcggctgctcgctgagcttttataatgccatccaggataagctggttaac
cgggtagaatcggttgcatcggttatcgacactcgcctgattacaacctccttcccggca
ctttcgcgtgaactggatgagttaatggtgcctgtggatatagtgcagatcgacattaaa
caggggaagcagaccgttttcagccatacccgtcagggcagctaccgtcctgccggcacg
gtagatcagtatcgggacataacggtacgctcacttaaacatccgggtatgacaatccat
ctgatgtaccaggacccgatgagcaactatttacgctcgctcatgaccaccgcgccctta
accatcgccgtagccttgatcgtcctgctgattttcctcgccgttcgctggcagcgtcgt
caactttccggccaggaactgctggaaacacgctcggtgcgaatactgaatggcgagcgg
ggtccgcaggtacggggatcggtttatgaatggccatcacgtaccagtagcgccctggac
gtgctgctctccgaaatccagtttgccagcgatcagcgtagccgtatggacacgttgatt
cgctcctacgccgcgcaggataacaaaacgggccttaacaaccgtctcttctttgataat
cagctggctacgcttcttgatgatcccgaaaaggtggggacgcatggcgtggtaatgatg
attcgcctgcccgacttcgatctgctccgtgatacctggggccagcgcgtggcggaagag
aacctcttcacgctgattaacctgctatccacctttattatgcgctaccccggcgcgtta
ctggcacgctaccaccgcagcgactttgccgtcttgctgccgcatcgcaccttaaaggag
tccgagagtatcgccagccagctgttgaaagccgtcgatgcgctaccccagagcaaaatg
ctcgaccgcgacgacatggtgcatatgggcatctgtgcctggcgcggcggtcagtcgacg
gagcaggtgatggaacatgcagaagcggccacgcgcaacgccgtattgcagggggcgaac
ggctgggcggtctatgatgatacgctaccggaaaaagggcgcggcaacgtacgctggcga
accctgattgaacagatgctgagccggggtggaccgcgcatctatcaaaaaccggcggtc
ataaaaaatggtcatgtccatcatcgtgagctgatgtgccgtatttttgatgggaccgag
gaggttatctccgcagagtatttgccgatggtgctgcaattcggattgtccgaagagtat
gaccgccagcaaatcacccgcctcattccgtttttatcgtactggcctgaagaaaatctg
gctttacaggtgaccgtcgaatcgctgatccgtccgcgttttcagcgttggttacgtgac
acgttaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgcagaggca
gatgtaggtcaacacatcagccggttgcgctcggttgtgcgtttaatcaatgcgcttggg
gctcgcgtggcggtaacacaggcgggtcttaccctggtcagcaccagctggatcaaagag
ctggatgtcgaattattgaagctgcatccgggtctggtaaggaatatcgaaaagcgcacg
gaaaaccagctgctggtacaaagcctggtggaggcgtgcaaaggaacgcaaacgcaagta
tttgccgcaggcgtacgttcacgcagtgaatggcagatgttgacagagcgcggcgtgacg
ggcggtcagggggatttttttgccgcctctcagccgcttgacaccaatgtgaaaaaatat
ttgcaaagatactctgtttga
DBGET
integrated database retrieval system
