Enterobacter hormaechei subsp. hoffmannii ECR091: ECR091_01140
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Entry
ECR091_01140 CDS
T03378
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eclc
Enterobacter hormaechei subsp. hoffmannii ECR091
Pathway
eclc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECR091_01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclc03019
]
ECR091_01140
03400 DNA repair and recombination proteins [BR:
eclc03400
]
ECR091_01140
Enzymes [BR:
eclc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECR091_01140
Messenger RNA biogenesis [BR:
eclc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECR091_01140
DNA repair and recombination proteins [BR:
eclc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECR091_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIN26305
LinkDB
All DBs
Position
233902..235731
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRQDIVRLLGLKDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGEVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgtcctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgcctggtggtcatgccgaccggcggcggaaaatcgctctgctatcaggtgccc
gcgctggtacttaatggcctgacggttgtggtctccccccttatttccctgatgaaagac
caggtcgaccagctgcttgccaacggcgtggcggcggcctgtcttaactcgacgcaaacc
cgcgagcagcagcaagaggtgatggccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccagagcgcctgatgctggacaacttcctcgaccacctggcgcactggaacccg
gtgctgctggcggtggatgaagcgcactgtatctcccagtgggggcacgatttccgcccg
gaatatgccgccctcggccagctgcgtcagcgcttccctgagctgccgtttatggcgctt
accgccacggcggatgacaccacgcgtcaggacatcgttcgcctgctggggctgaaagac
ccctatattcaggtcagcagcttcgaccggccgaacatccgctatatgctgatggaaaaa
ttcaagccgctggatcagctcctgcgctacgtgcaggagcagcgcggcaagtccggcatc
atctactgcaacagccgcgcgaaggtggaagacaccgctgcgcgtctgcaaaatcgcggc
tttagcgcggcggcataccatgccgggttagaaaaccacatccgcgccgacgttcaggaa
aaattccagcgcgacgacctgcaaatcgtggtcgcaacggtggcgttcgggatggggatc
aacaagcccaacgtgcgctttgtggtgcactttgatatcccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgtgatggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctcgaggagaaaccgcaggggcagttg
caggatatcgaacgccacaagcttaacgcgatgggtgccttcgccgaagcgcaaacttgc
cgccgtctggtactgctcaactactttggtgaagggcgacaggcgccgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgacggtctgatggacgcgcgcaaagcgctc
tcgactatcggacgcgttaaccagcgctttgggatgggctacgtcgtcgaagtgctgcgc
ggggctaacaaccagcgtatccgcgacatggggcacgacaagctgccggtttacggcatc
gggaaagaccagagccacgagcactgggtaagcatcatccgccagctgatccatctcggc
tttgccacgcaaaatattgctcagcactctgcgcttcagcttaccgaagcggcgcgaccg
gtcctgcgcggtgaggttgaactgaagctcgccgttccgcgcgtcgtcgccctgaagccg
cgcgtgatgcagaaatcctacggcggcaactacgatcgcaagctgttcgccaagctgcgc
aagctgcgtaaagcgattgcggatgaagagaacatcccgccatacgtggtgttcaatgac
gcgacgctgatcgagatggccgagcaaatgccactcagcgccagcgagatgctcagcgtc
aacggcgtcggcacgcgcaagctggagcgctttggtaaagagtttatggcgcttatccgt
tcccacgctgatggtgatgatgaggagtag
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