Enterobacter hormaechei subsp. hoffmannii ECR091: ECR091_06735
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Entry
ECR091_06735 CDS
T03378
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eclc
Enterobacter hormaechei subsp. hoffmannii ECR091
Pathway
eclc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECR091_06735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclc03019
]
ECR091_06735
Enzymes [BR:
eclc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECR091_06735
Messenger RNA biogenesis [BR:
eclc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECR091_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
AAA_22
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AIN27353
LinkDB
All DBs
Position
1420818..1422200
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AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVHEYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPTR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKSSGK
PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtctgaacccggaaattctgcgcgccatcgcagagcagggc
tacgttgagccaacccctattcagcagcaggctatcccggccgttttgcagggccgtgac
ctgatggcaagcgcgcagaccggtactggtaagaccgcgggctttaccctgccgctgctg
gagctgctggtaaaaaaccagccacacgccaaaggccgtcgtccggtgcgtgcgctgatc
ctcaccccaacccgcgagctggcggcccagattggtgagaacgtgcatgaatacagccgc
tatctcaacattcgttcgctggtagttttcggcggggtaagcattaacccgcagatgatg
aagctgcgcggcggcgtcgacgtgctggtggcaaccccggggcgtctgctggatctcgaa
caccagaacgcggtgaagctcgataacatcgaaattctggtgctggacgaagccgaccgt
atgctcgacatgggcttcatccacgacattcgccgcgtgctggcgaagctgccgacgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtcgcgcgccgcaacaccgcctccgagcaggtg
acgcagcacgtgcattttgtagataagaagcgcaagcgggaactgctctcccagatgatc
ggccagggcaactggcagcaggtgctggtctttacccgcaccaagcacggcgccaatcac
ctggcggaacagctgaataaagatggcatccgcagcgcggccattcacggcaacaagagc
cagggcgcgcgtacccgcgcgctggcagacttcaagtccggcgacatacgcgtgctggtg
gcaaccgacatcgccgcacgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgttcaccgtatcggccgtaccggacgcgcggcg
gcaaccggggaagcgctctctctggtttgcgtggatgagcacaagctgctgcgcgacatc
gaacgcctgctgaagaaagagatcccgcgtattgaaaccccgggctatgaagttgacccg
tcaatcaaagccgagccaattcagaacggtcgtcagggtggcgggcgcggtcagggcggc
ggtggtcgcggtcagcagccgcgtcgtgccgaaggcggcgcgccgaaatcttcgggcaaa
ccgccgcgtcgtaataacgacagcaaaccggccggtgaaaacccatggcgtagcggcgaa
gggaaaccggcaggcgaggggcagcgccgacgccgcccgcgtaagcctgctaacccgcag
taa
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