Enterobacter hormaechei subsp. hoffmannii ECR091: ECR091_16940
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Entry
ECR091_16940 CDS
T03378
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eclc
Enterobacter hormaechei subsp. hoffmannii ECR091
Brite
KEGG Orthology (KO) [BR:
eclc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eclc03016
]
ECR091_16940 (truD)
Enzymes [BR:
eclc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ECR091_16940 (truD)
Transfer RNA biogenesis [BR:
eclc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECR091_16940 (truD)
Prokaryotic type
ECR091_16940 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIN29279
LinkDB
All DBs
Position
complement(3584589..3585638)
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AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPQGKGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLNIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYVRHKRK
LRLGALKGNAFTLVLREVTEREDVEKRLKAINERGVPNYFGAQRFGIGGSNLLGALRWAQ
SGAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATAEE
MADVQSRVDAKTLMITAALPGSGDWGTQGEALAAEQSAVADAPELQSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttcgacaatctgacgtatctgcacggtaaaccgcagggcaagggtctgctg
aaagccaaccctgaagatttcgtggtagtggaagatctgggttttgagccggacggcgaa
ggcgagcacatcctggtgcgcattctgaaaaacggctgcaacacccgcttcgtggcggac
gcgctggcaaaattcctcaatattcacgcccgcgaagtgagctttgccggtcaaaaagat
aaacatgccgtgaccgaacagtggctttgcgcccgcgtgcccggcaatgccatgcccgat
ttaagcaaatttgagcttgagggctgtaaggtactggagtatgtccgccataaacgcaaa
ttgcgtctgggcgcactgaaaggcaatgcctttaccctggtgttgcgcgaagtgaccgaa
cgcgaggacgttgaaaaacgcctgaaggccattaacgaacgcggcgtaccaaactatttc
ggcgctcagcgctttggtatcggtggtagcaacctgctgggcgcgctgcgctgggcgcaa
agcggtgcaccggtgcgcgatcgtaataaacgcagtttttggttgtcggcggcccgcagt
gcgttgtttaatcagattgtgagcgaacggctgaaaaaaccggacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcgggacgcggaagctggtttgtggcaacggccgaagag
atggccgatgtccagtcgcgcgtggacgctaaaacgctgatgattaccgccgccttgccg
ggttcaggcgactggggaacccagggcgaggcgctggccgctgagcagtcagcggtggcg
gatgcgccagaattacaatcgttgctggtgcgggaaaaggtcgaggcggcacgtcgtgcg
atgctcctctacccgcaacagctgagctggaactggtgggatgacgtaaccgtcgagtta
cgcttctggctgccggcaggtagctttgccaccagtgttgtcagggaacttatcaacacg
tcgggtgattatgcgaatattgctgagtaa
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