Enterobacter hormaechei subsp. hoffmannii ECR091: ECR091_19445
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Entry
ECR091_19445 CDS
T03378
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
eclc
Enterobacter hormaechei subsp. hoffmannii ECR091
Pathway
eclc02020
Two-component system
eclc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eclc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECR091_19445
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECR091_19445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclc03021
]
ECR091_19445
Transcription machinery [BR:
eclc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECR091_19445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AIN29753
LinkDB
All DBs
Position
4102035..4103468
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEIDAQQ
TQDTETLDSVDALEQKEMPEELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDEILESIGDDEIELEEIEAVLK
RVQRFDPIGVAAKDLRDCLLIQLSQFAKETPWIDEARLIISEHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNGRWVVELNADSIPRLQIN
QQYASMCTSARNDADNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattacggctcagccagcaactggccatgacgccgcagctacaa
caggcaatccgtctgttgcagctgtccacgttagaactccagcaggagctccagcaggcg
ctggacagcaatccgctgctggagcaaaccgatcttcatgacgagatagacgctcagcag
acgcaggacacagaaacgctcgactccgtagatgcgctcgaacagaaagagatgccggag
gaactgccgctggatgccagctgggatgaaatctacaccgcgggtaccccttccgggacg
cgtgcagattaccaggacgatgaactcccggtctaccagggcgaaactacccagtcgctt
caggactacctgatgtggcaggtggagctgacgcctttctccgataccgatcgcgccatt
gccacctcgattgtcgatgccgttgacgacacgggctatttgaccgtgacgctggacgag
attctggaaagcatcggcgatgacgagattgaactggaagagatcgaagccgtcctgaaa
cgcgttcagcgtttcgacccgattggcgtcgccgcgaaagatctgcgcgactgccttctg
atccagctttcgcagtttgccaaagagacaccgtggattgacgaagcccggctcatcatc
agcgagcatctggatttgctggcaaatcacgacttccgcaccctgatgcgcgtcacgcgc
ctcaaagaagaggtgctgaaggaagcggtgaatctgatccagtcactcgatccgcgtccg
gggcaatctatccagaccagcgaaccggaatacgttattcctgatgtgctggtgagaaaa
cacaatggccgctgggtcgttgaactgaacgccgacagcattcctcgcctgcaaatcaac
cagcaatacgcctccatgtgcaccagcgcccgtaacgacgctgataatcaatacattcgc
agcaaccttcaggaagcacgctggttgattaagagtctggaaagccgtaatgacacgctg
ctgcgcgtcagccgctgtattgtcgaacagcagcaggcattctttgagcagggcgaagag
tttatgaaaccgatggtgctggcggacatcgcccaggccgtcgagatgcatgaatcaacc
atttcccgcgtgaccacgcagaagtatctgcacagcccacgcggtatttttgagcttaag
tatttcttctccagccacgtgaacaccgaaggcggcggcgaagcctcgtcaacggctatt
cgcgccctggtgaagaagttgatcgccgcggagaaccccgcgaagccactcagtgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgccgtactgtcgcgaag
tatcgagagtctttatccattccgccgtctaaccagcgtaaacaactggtttga
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integrated database retrieval system
