Enterobacter cloacae ECNIH2: ECNIH2_01600
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Entry
ECNIH2_01600 CDS
T03471
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecle
Enterobacter cloacae ECNIH2
Pathway
ecle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH2_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecle03019
]
ECNIH2_01600
03400 DNA repair and recombination proteins [BR:
ecle03400
]
ECNIH2_01600
Enzymes [BR:
ecle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECNIH2_01600
Messenger RNA biogenesis [BR:
ecle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECNIH2_01600
DNA repair and recombination proteins [BR:
ecle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECNIH2_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIE62106
LinkDB
All DBs
Position
324907..326736
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMTGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRQDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGEVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcaggaaacc
tttggctaccagcagttccgtcctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgcctggtggtcatgccgaccggcggcggtaaatcgctctgctatcaggtgccc
gcgctggtgcttaatggcctgacggtcgtggtatcgccccttatttccctgatgaaagac
caggtcgaccagctgcttgccaacggcgtggcggcggcctgcctgaactcgacgcagacc
cgcgagcaacagcaagaggtaatgaccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccagaacgcctgatgctggacaacttcctcgatcatctggcgcactggaatccg
gtgctgctggcagtggatgaagcgcactgtatctcccagtgggggcacgatttccgcccg
gaatacgccgcgcttggccagcttcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggacgacaccacgcgtcaggacatcgttcgcctgctggggctgaacgac
ccgtatattcaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggagaag
ttcaagccgctggatcagctcttacgctacgtgcaggagcagcgcggaaagtccggcatc
atctactgcaacagccgggcgaaggtggaagacaccgccgcgcgtctgcaaaaccgtggc
tttagcgccgcggcctatcacgccgggctggagaaccatatccgcgccgacgtgcaggag
aaattccagcgcgacgacctgcaaatcgtggtcgcaacggtggcgttcgggatggggatc
aacaagcccaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctcgaggagaaaccgcaggggcagttg
caggatatcgaacggcacaagcttaacgcgatgggggccttcgccgaagcgcaaacctgc
cgccgtctggtgctgctcaactactttggtgaagggcgtcaggcaccgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgatggcctgatggacgcgcgcaaagcgctc
tcgactatcggacgcgtgaaccagcgcttcgggatgggctacgtcgttgaagtgctgcgc
ggggctaacaaccagcgtatccgcgatatgggtcacgacaaactgccggtttatggcatc
gggaaagaccagagccacgagcactgggtgagtatcatccgccagctgatccatctcggc
tttgccacgcagaacattgcccagcactctgcgcttcagctgaccgaagcggcgcgaccg
gtcctgcgtggcgaggttgaactgaagctcgccgttccgcgcgttgtcgccctgaagccg
cgcgtgatgcagaaatcctacggcggtaactacgatcgcaagctgttcgccaagctgcgt
aagctgcgtaaagccattgcggatgaagagaacatcccgccatacgtggtgttcaacgac
gcgacgcttatcgagatggccgagcaaatgccgctcagcgccagcgagatgctcagcgtc
aacggcgtcggcacgcgtaagctggagcgctttggtaaagagtttatggcgctcatccgt
tcccacgctgatggtgatgatgaggagtag
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