Enterobacter cloacae ECNIH2: ECNIH2_07660
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Entry
ECNIH2_07660 CDS
T03471
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ecle
Enterobacter cloacae ECNIH2
Pathway
ecle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNIH2_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecle03019
]
ECNIH2_07660
Enzymes [BR:
ecle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECNIH2_07660
Messenger RNA biogenesis [BR:
ecle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECNIH2_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AIE63242
LinkDB
All DBs
Position
1584925..1586307
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AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPTR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKSSGK
PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtctgaacccggaaattctgcgcgccatcgcagagcagggc
tacgttgagccaacccctatccagcagcaggccattccggccgttttgcagggccgtgac
ctgatggcaagcgcgcagaccggtaccggtaagaccgcaggctttaccctgccgctgctg
gagctgttggtaaaaaaccagccgcacgccaaaggccgtcgtccggtgcgtgcgctgatc
ctcaccccaacccgcgaactggcggcccagattggcgagaatgtgcgtgaatacagccgc
tacctcaacattcgttcgctggtggttttcggcggggtaagcattaacccacagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccggggcgtctgctggatctggaa
caccagaacgcggtgaagctcgataacatcgaaattctggtgctggacgaagccgaccgt
atgctggatatgggcttcatccacgacattcgccgcgtgctggcgaagctgccgacgcgt
cgtcagaacctgctcttctccgcgactttctccgacgagatcaaggcactggcggaaaag
ctgctgcataacccgctggaagtggaagtcgcgcgccgcaataccgcctccgagcaggtg
acgcagcacgtgcactttgtggataagaagcgcaagcgggaactgctctcccagatgatc
ggccagggcaactggcagcaggtactggtctttacccgcaccaagcacggcgctaaccac
ctggcggaacagctcaataaagacggtattcgcagcgcggcgatccacggcaacaagagt
caaggtgcgcgtacccgcgcgctggctgattttaaatccggcgacatacgtgtgctggtg
gcaaccgacatcgccgcccgtggcctggacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagactacgtgcaccgtatcggccgtaccggccgtgcggcg
gcaaccggggaagcgctctctctggtctgcgtggatgaacacaagctgctgcgcgacatc
gaacgcctgctgaagaaagagatcccgcgcattgagaccccgggttatgaagtggatccg
tcgatcaaagccgagccaattcagaacggtcgtcagggcggcggtcgcggtcagggcggc
ggcggtcgcggtcagcagccgcgtcgtgccgaaggtggcgcgccgaaatcttcgggcaaa
ccgccgcgtcgtaataacgacagcaaaccagccggtgaaaacccgtggcgtagcggcgaa
gggaaaccggcaggcgaggggcagcgccgacgccgcccgcgtaaacctgctaacccgcag
taa
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