Enterobacter cloacae ECNIH2: ECNIH2_12955
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Entry
ECNIH2_12955 CDS
T03471
Name
(GenBank) type IV secretion protein Rhs
Organism
ecle
Enterobacter cloacae ECNIH2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
AIE64255
LinkDB
All DBs
Position
complement(2712193..2716656)
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AA seq
1487 aa
AA seq
DB search
MSDNNAARKGDEIIHSSIFADITSIVAEGAAYAVIGAAVGAAATVAAPLLGAGAAAAGVA
AIGSSCLLSGIIGGVLANVAGITDDISNAAEGLGNALFPPSPAGKITTGSSNVLTNKLPA
ARAAGTLTPADTPSPEPQSPGSFADYAGMLLSAAGQFGSEMWQPSVASAAAGTSPLEEDK
VACDKHSGPQYLAEGSKSVFINGQPAVRAKDRTTCEGTVSDDVSPNVIIGGDTLTVRDIK
SGKTPGLALGMIALSLLRGRPGKILKNMPCALAAAGGGMLADMAVNAVFGSSHPVHAATG
VKVLNDDDELDFSLPGRFPLRWQRSYNSLTTREGLFGLGWATTFDSYLALEENNATWFDE
TGRELSFELPPVDRAFYSISEGIIIRRNESGDVAIADDDGAVWRLYKPTRANPSILRLAS
LSDEYGNALLTEWDEHGRLVGLHDEPRAIDVTLRYDDERFPQRVTAASHFDGNQTWPLMQ
WGYDARGQLASATDASGVVTREYRYNDDGLMVWHRLPGGLESEYRWQKFDHWRVVENRTS
TGDGCRFTYDLAAGLTTVDHYDGQTRKHYWNAQNLIVRYVDERGENWRYEWDDNELLTRR
IDPLGNAVTFVYDEMGNRVQEIDADGNTRTTTWLEHRALPASIIEADGSATRFLYDEHHG
LKRVVDPMGQTTLLRRDEFGQVVEEVDAAGNSRYQEYNEAGQMVRATDCSGRVTQYRYHP
LGWLVAEISADGEETRYRYDAAGRPVQLDRSEGWTESLKWNERGLPVKHAGADGKESEFR
YDEAGRLTATRNTQGEEVRRRWDSRGRLVAMENENGEAYQFRWGADSLLLEEVGLDGVAS
QYRYDACGRTIARTFAAGHPEAITHAFAWSASGQLVARTTPEGQTRYHYTPSGLLSRIGL
HPALSEDAWSAEAEQELVFEYDALGRVTRETGEHGELAWEYDALGNRTSVTLPDGRELKQ
FYYGSGHLLSIALDKLSVSDFTRDELHRETSRTQGLLTTRSEYDRLGRLHRRDVFTGNAQ
RPSPRRWSRRWDYDYRNNLVREERDDNPFSWYRWQYDSAGRLLVQDGTLPGQEQWRWDAA
GNPLEGSAEKVTHNRLTHLNGIRWRYDIHGRTVEKDNGQTRWNYRYDGEHRLTEVISQPR
DRNRPQTQVNFRYDPLGRRISKTRRQMLGGQPTGKPVTTRFVWEGFRLLQEVHGDVPLTY
VYSDQDSYDPLARIDGVDAPEFFWFHCQPNGTPERMTDSEGQVRWEGVNSAWGKLLRESE
TQVSGYSQNLRMQGQYLDRETGLHYNLFRYYDPDCGRFTQQDPIGLAGGINLYQYAPNAL
GWVDPLGLRCGRTNTWNDFQRQHKGRFKSSTEAASAYNKLVNEQSPWPLNEPPLDATLVP
GTRVKMAVSPGQPATRPGGFATFDDIPNASYVRNELAVKMEWKPDIDRVITYEVKKPLPV
KIGAVGPQVDKGANVYLPGGGSQVEMAVPPAERMNYLEVIDESLLKP
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacaacgcggcccgtaagggcgacgagattattcactccagcatttttgct
gatattaccagcattgtggcggaaggtgccgcctatgcggtgattggcgcggcggtgggc
gcggcagcgaccgtcgcggccccactgctgggagccggggccgcagcagcaggcgtggcg
gcgattggatccagctgtctgttgagcggcattatcggcggggttctggcgaacgtcgcc
gggatcaccgacgatatcagcaacgccgctgaagggctgggtaacgcgcttttcccgccg
tcgcccgcgggcaaaatcaccaccggttcgagcaatgttctgacaaataaacttcccgct
gcacgcgccgccgggacgttaacccctgccgataccccgtcccctgagccgcagtcgccg
ggcagctttgccgactacgcgggcatgctgctctccgctgccggacagttcggcagcgag
atgtggcagccgagcgtcgcctctgccgccgcagggacctcgccgctggaagaagacaag
gtggcgtgtgataaacactccgggccgcagtatctggcggaaggctcgaaaagcgtcttc
atcaacggacagcctgcggtgcgcgcaaaagatcgcaccacctgcgagggcaccgtttcc
gacgacgtctccccgaacgtgatcataggcggcgacacgctcacggtccgcgatatcaaa
agcggtaaaacgccgggtctggcgctggggatgattgcgctctccctgctgcgcgggcgg
ccaggcaagatcctgaaaaacatgccctgcgcgctggctgctgccggtggcgggatgctg
gcggatatggccgtcaacgccgtgttcggctcctcgcacccggttcacgccgctaccggc
gtgaaggtgctgaatgacgacgacgaactcgatttctcgctgccagggcgctttccgctg
cgctggcagcgcagctacaacagcctgaccacccgcgaagggcttttcggtctgggctgg
gctaccacctttgacagctatctggcgctggaagaaaacaacgccacctggttcgatgaa
accgggcgcgagctgagctttgaactgccgccggtcgaccgcgcgttttacagcatcagc
gaaggcatcattatccgccgcaatgagagcggcgacgtggcgatagctgacgatgacggc
gcggtgtggcgtctgtataaaccgacccgcgctaacccctccatcctgcgcctggcctcc
ctcagcgacgagtacggcaacgcgttgctgacggaatgggatgagcacgggcggctggtc
ggtctgcacgatgagccgcgagcgatcgatgtcaccctgcgctatgacgatgaacgtttc
ccgcagcgcgttaccgctgccagccattttgacggcaaccagacatggccgctgatgcag
tgggggtacgacgcgcgcggccagctggccagcgcaacggatgcctccggcgtggtaacc
cgtgaataccgttataacgatgatggcctgatggtctggcaccgtctgccgggcgggctg
gagagcgaataccgctggcaaaaattcgaccactggcgcgtggtggaaaatcgcaccagc
accggcgacggctgtcgctttacctacgatttagccgccgggctgacgaccgtcgatcac
tacgacggtcagacgcgaaagcattactggaacgcgcaaaacctgattgttcgctacgtt
gacgagcgcggtgagaactggcgctacgagtgggatgacaacgaactcctcacgcgtcgc
atcgatccgctgggtaatgccgttaccttcgtctatgacgagatgggcaaccgggtgcag
gagatcgacgccgacggcaatacccgcaccaccacctggctggagcaccgtgcgcttccg
gcgtccatcatcgaagccgacggtagcgccacccggttcctgtatgacgaacatcacggg
ctgaaacgcgtggtggatccgatggggcagaccacgctgctgcgtcgggacgagtttggt
caggttgtggaagaagttgatgccgccgggaacagccgctaccaggagtacaacgaagcc
gggcagatggtgcgtgcgacggactgttctggccgcgtgacacaataccgttatcatccg
ctgggctggctggtggctgagataagcgccgacggcgaagagacgcgttaccgctacgac
gccgcggggcgtccggtgcagctcgaccgatcagaaggctggaccgagtcgctcaaatgg
aacgaacgtggtctgccggtgaagcatgcgggcgccgacgggaaagagagcgagttcaga
tacgacgaggcagggcgcttaaccgccacccgcaatacgcagggtgaagaggtgcgccgc
cgctgggacagccgcggacggctggtcgccatggaaaacgaaaacggcgaagcgtatcag
ttccgctggggcgcagactcgctgctgctggaagaggtgggactcgatggcgtggcctcg
cagtatcgctacgatgcctgcggacgtacgatagcgcgcacctttgccgccggacatccg
gaggccatcacccacgctttcgcctggagcgcgagcggccagctggtcgcccgcaccacg
ccggaggggcagacccgctaccactacaccccgtccggccttctgagccggattgggctg
catcccgcgctttcagaagatgcctggagcgccgaggccgagcaggagcttgtgtttgag
tatgacgcgctcgggcgcgtcacgcgcgaaacgggcgaacacggggagctggcgtgggag
tatgacgcgctgggtaaccgcacctccgtcacgctgcccgatggtcgggagctgaaacag
ttctactacggtagcgggcatctgctcagcattgcccttgataagctgtcggtctccgac
tttacccgcgacgaactccaccgtgaaaccagccgtacgcaggggctgctgaccacccgc
agcgaatacgaccgccttggccgactgcatcgccgggacgtctttaccggcaatgcccag
cgcccgtcgccgcgccgctggtcccgccgctgggattacgactatcgcaataacctggtg
cgggaagagcgggacgataacccgttcagctggtaccgctggcagtacgacagcgccgga
cgtctgctggttcaggacggcacgctgcccggccaggagcagtggcgctgggatgctgcc
ggtaacccgctcgaaggctctgctgagaaggtcacgcacaaccgtctgacgcacctcaac
ggcattcgctggcgctatgacatccacggccgcaccgtggagaaggataacggccagacc
cgctggaactaccgctacgacggcgagcaccgcctgacggaggtcatcagccagccgcgg
gaccgcaacaggccgcagacgcaggtcaacttccgctatgacccgctcgggcgacgcatc
agcaaaacgcgccgccagatgctgggcggccagccaaccggcaagccggtcaccacccgg
tttgtctgggaagggttccggctgttgcaggaggtgcacggggatgtgccgctcacctac
gtctacagcgatcaggacagctacgatccgctggcacgtattgacggcgttgatgccccg
gaattcttctggttccactgccagcccaacggcacgccggagcggatgacggatagcgaa
gggcaggtgcgatgggaaggggtgaacagcgcctggggcaaactgctgcgggaaagcgag
acgcaggtatcaggatattcccagaacctgcgtatgcaggggcaatacctggaccgtgag
acagggctgcactacaatctgttccggtattacgacccggactgcggaaggtttacgcag
caggacccgatagggctggcgggagggattaacctttaccagtatgcgccgaatgcgctg
ggttgggtggatccattaggtttacgatgtgggcgaactaatacttggaatgattttcag
cggcagcataaaggtcgtttcaaatcatcaactgaagcggcttctgcttataacaaatta
gtgaatgaacaatcgccttggccattaaatgagcctcctttagatgcaacattagtccca
gggactcgagtaaaaatggccgtatctccaggccagccagcgacgagacctggagggttt
gctacatttgacgatattcctaatgcttcatatgttagaaatgagctcgctgtgaagatg
gaatggaaaccggatattgatagagtaataacttatgaagttaagaaaccattaccagtt
aaaattggtgcagttggacctcaagttgataaaggtgcgaatgtatatctgcctggcggc
ggttcacaagtcgaaatggctgtgccacctgcagaacgcatgaattatttggaagttatt
gacgagtcgttgctcaagccctaa
DBGET
integrated database retrieval system
