Enterobacter cloacae ECNIH2: ECNIH2_18415
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Entry
ECNIH2_18415 CDS
T03471
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ecle
Enterobacter cloacae ECNIH2
Pathway
ecle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECNIH2_18415 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecle03400
]
ECNIH2_18415 (recD)
Enzymes [BR:
ecle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ECNIH2_18415 (recD)
DNA repair and recombination proteins [BR:
ecle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECNIH2_18415 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_28
MukB
CbiA
UvrD_C
T2SSE
NPHP3_N
SRP54
ATPase
Phageshock_PspD
NTPase_1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AIE65282
LinkDB
All DBs
Position
complement(3815641..3817461)
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AA seq
606 aa
AA seq
DB search
MTMQDLLLDAVEQRVLRQLDVQFAMMIAADQPAVMLAAALLSKDAGEGHVCLPLSRLVVD
EKMPPVLQSCFALLGDKVDWQKILRESSAVGPGDNQAPLILTGERLYLNRLWRNELTVAR
FFSETNAPLPCDEAQLRQTLDRLFDSGEATDWQKVAAAVALTRRISVISGGPGTGKTTTV
AKLLAALIQLSGEQRCRIRLAAPTGKAAARLTESLGGAMQRLPLTQEQLALFPGEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVVFLGDRDQL
ASVEAGAVLGDICTYASYGYTAARAQELARLTGCSLEPDHTPIAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHATRTVFDGSFTDIEKKSLQSGEEYQAMLEEALQGYQHFLSC
VQQRSQPGQVIAAFGEYQLLCALREGPFGVAGLNDRLEQLLVQKRKINRQLHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGNGLRVWFQLPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFNHAALILPTQLSPVVTRELVYTAITRARQRLSLYADERVLSQAIATRTERRSGLS
AIFESV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggacttattgctggatgcggtagagcaacgcgtgctgcgtcagctggac
gtgcagtttgccatgatgattgccgctgaccagcccgccgtgatgcttgccgctgccctg
ttgagtaaagatgccggagaggggcatgtgtgtctgccgctctcgcgtctggtggttgac
gagaaaatgccgcctgtcctccagtcctgctttgcgctgctgggagataaggtggactgg
cagaaaatcttgcgtgaatcgtcagccgtcgggccgggagacaaccaggcaccgctgatc
cttacgggggagcgcttatacctgaaccgcctgtggcgaaacgaactgacggtagcgcgt
ttctttagtgagaccaatgcgccgcttccctgcgacgaagcacagcttcgccagacgctg
gacaggctgtttgactccggtgaggccacagactggcagaaagtggcggcagccgtcgcc
ctgacgcggcggatctcggtgatatccggcggcccgggaaccgggaaaacaacgaccgtc
gcaaagctgctggcagccctgatacagctttcaggcgagcagcgatgccgtattcgtctg
gcggcgcccaccgggaaggccgcggcgcgtctgaccgaatcactgggcggtgcgatgcaa
cggctgccgctcacccaggagcagcttgcgcttttcccgggtgaagcaagtactctgcac
cgtctgctcggcgcgcagccgggtagccagcggctgcgctaccatgcgggcaatccgctg
catctggacgtgctggtggtggatgaagcctccatgatcgacctgaccatgatgtcgcgc
ctgatcgatgcgctaccaccccatgcgcgcgtggttttcctgggcgatcgcgaccagctc
gcctctgtagaagccggggcggtgctgggagatatctgtacctacgccagttacggttat
accgccgcgcgggcgcaggagctcgcccgtctgaccggttgctcgcttgaacccgatcac
acgccgatcgcgggcgcactgcgtgacagcctgtgcctgctgcaaaaaagctaccgtttc
ggtagcgactccggcatcggccagctggctgcggcggtcaaccgtggcgacaggcacgcc
acgcgcacggtgtttgacggttccttcactgacattgaaaagaaatcgctgcaaagcggg
gaagagtatcaggctatgcttgaggaggctctccagggataccagcattttctgagctgc
gtgcagcagcgcagtcagcccgggcaggtcatcgccgcatttggcgaataccagcttctg
tgcgcattgcgggaagggccgtttggcgtcgcgggcctgaacgacaggctggagcagctg
ctggtgcagaagcgcaaaattaaccgtcagctgcattcgcgatggtatgagggccggcca
gtgatgatctcccgcaacgacagtgcgctggggctgttcaacggggatatcggcattgcg
ctcgatcgcggtaacggtctgcgcgtctggttccagctaccggacggtagcgtgaagtcc
gtccagcccagccgcctgccagagcatgaaacggcatgggcgatgacggtacataaatct
cagggctccgagttcaaccatgcggcgctgatcctgccgacacagctgtcgccggttgtg
acccgcgagctggtctacaccgccattacccgtgcgcgccagcgtctttcactgtatgcg
gatgagcgcgtgttgagtcaggcgattgccactcgtaccgagcgcagaagcggattaagc
gcgatatttgaatctgtctga
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