Enterobacter cloacae ECNIH2: ECNIH2_21070
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Entry
ECNIH2_21070 CDS
T03471
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ecle
Enterobacter cloacae ECNIH2
Brite
KEGG Orthology (KO) [BR:
ecle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecle03019
]
ECNIH2_21070
Messenger RNA biogenesis [BR:
ecle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECNIH2_21070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AIE65797
UniProt:
A0A9W3LQS0
LinkDB
All DBs
Position
complement(4365280..4367220)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLIATSFPA
LSRELDELMVPVDIVQIDIKQGKQTVFRHTRQGSYRPAGTVDQYRNVTVNSLKHPGMTIH
LMYQDPMSNYLRSLMTTAPLTIAVAFIVLLIFLAVRWQRRQLSGQELLETRSVRILNGER
GPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
MKNGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPLVRLINALG
ARVAVTQAGLTLVSTRWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV
FATGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcttttatcaccttgctgacggggctgaccatattt
gtcacgctaatcggctgctcgctgagcttttacaatgccatccaggataagctggttaac
cgggttgaatcggttgcatcggttatcgacactcgcctgattgcaacctccttcccggcg
ctttcgcgtgagctggatgagttaatggtgcctgtggatatcgtgcagatcgacattaaa
caggggaagcagaccgttttccgccatacccgccagggcagctatcgtcctgccggcacg
gtagatcagtatcggaacgtcacggttaattcacttaaacatccgggtatgacaattcat
ctgatgtaccaggatccgatgagcaactatttacgctcgcttatgaccaccgcgccctta
accatcgccgttgcctttatcgtactgctgattttcctcgccgttcgctggcagcgtcgt
caactttccggccaggaactgctggaaacacgctccgtgcggatactgaatggcgaacgg
ggtccacaggtgcggggatcggtttatgaatggccatcacgcaccagtagcgccctggac
gtgctgctctccgaaatccagtttgccagcgatcagcgtagccgtatggacacattgatt
cgctcttacgccgcgcaggataacaaaacgggcctcaacaaccgtctcttctttgataat
cagctggctacccttcttgatgaccccgaaaaggtgggtacgcatggcgtggtaatgatg
attcgcctgcccgacttcgatctgctccgtgatacctggggtcagcgcgtggcggaagag
aacctctttacgctgattaacctgctgtccacctttattatgcgctaccccggcgcgtta
ctggcacgctaccaccgcagcgattttgccgtcttgctgccgcatcgcaccttaaaggag
tccgagagtatcgccagccagctgctgaaagccgtcgatgcgctgccccagagcaaaatg
ctcgacagagacgatatggtgcatatgggcatctgtgcctggcgcggcggtcagtcgacg
gagcaggtgatggaacatgcggaagcggccacgcgtaacgccgtattgcagggggcgaac
ggctgggcagtctatgatgatacgctgccggagaaagggcgcggcaacgtgcgctggcga
accctgattgaacagatgctgagccggggcggaccgcgcatctatcaaaaaccggcggtc
atgaagaatggtcatgttcatcatcgtgagctgatgtgccgtatttttgatggcactgaa
gaggttatctccgcggaatatctgcccatggtgttgcaattcggattgtccgaagagtat
gaccgtcagcaaatcacccgtctcattccgtttttatcgtactggcctgaagaaaatctg
gctttacaggtgaccgtcgaatcgctgatccgtccgcgtttccagcgctggttacgtgac
acgttaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgcagaggca
gatgtaggtcaacacatcagccggttgcgcccgttagtgcgtttaatcaatgcgcttggg
gctcgcgtggcggtaacccaggcgggtttgacgctggtgagcacccgctggatcaaagag
ctggatgttgaattattgaagctgcatccgggtctggtaaggaatattgaaaaacgcacg
gaaaaccagctgctggtacaaagcctggtggaagcgtgcaaaggaacgcaaacgcaagta
tttgccacaggcgtacgttcacgtagtgaatggcagatgttgacagagcgcggcgtgacg
ggcggtcagggggatttttttgccgcctctcagccgcttgacaccaatgtgaaaaaatat
ttgcaaagatactctgtttga
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