Enterocloster clostridioformis: QMP25_03040
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Entry
QMP25_03040 CDS
T10536
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03420
Nucleotide excision repair
eclf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QMP25_03040
03430 Mismatch repair
QMP25_03040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_03040
Enzymes [BR:
eclf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMP25_03040
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMP25_03040
MMR (mismatch excision repair)
Other MMR factors
QMP25_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
ResIII
AAA_22
AAA_12
AAA_11
DEAD
tRNA-synt_1g
AAA_16
DUF1878
Motif
Other DBs
NCBI-ProteinID:
XBX14973
LinkDB
All DBs
Position
519131..520957
Genome browser
AA seq
608 aa
AA seq
DB search
MAFSDAQKMAIRHREGPMLVLAGPGSGKTTVITNRVRYLTEKAGVDPSHILVITFTRAAA
REMKERYEQITQAGCSRVSFGTFHSVFFLILKLAYRYKAADIVREEQRVQFIKEMLSKCD
LEVEDEGEFISSVLSEISMVKGDIMDMDHYYAKNCSEDMFRQLYRGYEARLRQNRLLDFD
DMLVMCYELFKERKDILSAWQDKYRYILIDEFQDINRIQYEIVKMLALPRNNLFIVGDDD
QSIYRFRGAKPELMLGFERDYPGAGKILLDTNYRCSRQIVEAAGRVISHNRTRFPKEIRA
ARGKGHPVIIKEWQEPIDETLGIVTEIRGYASMGISYNDMAVLYRTNMGPRLLISKLMEY
NIPFYMRDAVPNLYEHWISGNVISYIRAALGDLSRSNVLQIINRPKRYISRDALEDRQVN
WESVKSFYQDKNWMMDRIEQLEYDLAVLRNMAPAAAVNYIRKAVEYDEYIREYAQSRRMK
PEELFETLDQLQESAAGFKTYEHWFTHMEEYKEQLKKQAAGRDEQRQGVSLMTMHSAKGL
EFRVVYILDANEGVTPHHKAVLDPDVEEERRMFYVAMTRARERLHIYHVKERYRKKQAKS
RFAEEAEG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagcgacgcacaaaaaatggcaatccggcatagggaaggtcccatgctggtt
ttggcaggacccggttccggcaagacgacagtcatcaccaaccgggtccgttatcttacg
gaaaaggcaggcgtggatccctcccatattctggtaattacatttaccagggcagcggcc
agggagatgaaggagcgctatgaacagattacacaggcaggatgcagccgggtttccttt
ggaaccttccattctgtcttttttctgattctcaaactggcttaccggtataaggccgcg
gacattgtaagggaagaacagcgcgttcagttcataaaggaaatgctgtcaaaatgcgat
ttggaggttgaggatgaaggcgagttcatatcctctgtgctcagtgaaatcagcatggtg
aagggcgacatcatggacatggaccactactatgcaaaaaactgctccgaggacatgttc
aggcagctgtaccggggctatgaagcacggctgagacagaaccggctgctggattttgac
gacatgctggtgatgtgctacgagctgtttaaggaaagaaaagatatcctgtccgcatgg
caggacaagtacaggtacatattaatagatgagttccaggacattaaccggattcagtat
gaaatcgtaaaaatgctggcccttcccagaaacaacctgtttattgtgggggatgacgac
cagtccatttaccggttccgcggggcaaagccggagctgatgctgggctttgaacgggat
tatcccggtgcgggaaaaattctcctggataccaattaccgctgcagccgccagattgtg
gaggctgcggggcgggttatatcgcacaacaggacccgttttcccaaggaaatcagggcg
gcaagggggaagggccatccggtcatcataaaggagtggcaggagcccatagacgagacg
ttaggaatcgttacagagatacgcggctatgcctccatgggcatatcctacaatgatatg
gcagtgctctaccggaccaacatgggcccccgtctgctgatttccaagcttatggaatac
aacatacccttttatatgagggatgcggtgcctaatctgtatgaacactggatatccgga
aatgtgatttcctatatccgtgccgccttaggggatttgagccgttccaatgtgcttcaa
atcatcaaccgtcccaagcgctatatcagccgggatgccctggaggaccggcaggttaac
tgggagtcggtgaaatccttttaccaggacaagaactggatgatggaccggattgaacag
ctggaatatgatttggcggtgttgaggaatatggctccggccgcggccgtcaattacatc
cggaaggcagtggagtacgatgagtacatccgggaatacgcccagtccagaaggatgaag
ccggaggagctgtttgagacgctggaccagcttcaggaaagcgcggccggctttaagaca
tatgaacactggttcacccatatggaggaatataaggaacagcttaaaaaacaggcggca
ggcagggacgaacagcgccagggagtcagcctcatgaccatgcacagcgccaaggggctg
gaattcagggtggtctatatcctggacgccaatgaaggcgttacgccccatcacaaggcg
gttctggacccggatgtggaggaagaacgcaggatgttctatgtggctatgacaagggcc
agggagaggctccatatttatcatgtgaaggagcggtaccgcaagaaacaggcgaaatca
aggtttgcagaggaggcagaaggatga
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