Enterocloster clostridioformis: QMP25_05395
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Entry
QMP25_05395 CDS
T10536
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eclf Enterocloster clostridioformis
Pathway
eclf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QMP25_05395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclf03400
]
QMP25_05395
Enzymes [BR:
eclf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QMP25_05395
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QMP25_05395
DNA repair and recombination proteins [BR:
eclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QMP25_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Ribosomal_S13
Zn_ribbon_TFIIB
Zn_ribbon_3
DUF417
Zn_ribbon_SprT
DUF7575
Zn_Ribbon_1
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
XBX15379
LinkDB
All DBs
Position
977459..978277
Genome browser
AA seq
272 aa
AA seq
DB search
MAELPEISKITSQMNKELAGKTFFRIIVNQPKCLNMGCEDIERNCIGISISKVTHIGKWI
CIALCNSYYILISLGMGGDILYKTNSLDLKNEKYHIIIHFTDGSGFVIRFYWFGKFHFTK
NLEAHSQTKNIAPSPFDVSFNYESFKKIFQNRRRSIKSILLDQTMISGVGNMYVHDILFL
AKLHPGSIAKHLQDDEIENLYRSILYVLNNSKSKETFAYEKDFYGNYGKFNTNNFIVAYR
KDEKCPNCGKKIEKIKIGNTSSYICSNCQVKK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattaccggaaattagtaagattactagtcaaatgaataaagagcttgctgga
aaaacattttttcgtataattgttaatcagccaaaatgcttgaatatggggtgtgaagac
atagagcgtaattgtatagggattagcatatcaaaagttacacatattggtaaatggata
tgtattgctttatgtaacagttattatattctaatttcattaggtatgggaggggatatt
ctttacaaaacaaatagcttagatttaaagaacgaaaaataccatattataatacatttt
actgatggctctgggtttgtaatacgtttttattggtttggcaaatttcattttactaaa
aatcttgaagcacatagtcaaacaaaaaatattgcacctagtccatttgatgtatctttt
aattatgagtcatttaagaaaatatttcaaaaccgtagaagaagtattaagtctatacta
cttgatcaaacgatgattagtggcgtaggcaatatgtatgtacatgatatattatttttg
gcaaaattacatccgggtagcatagcaaagcatttgcaggatgatgaaatcgaaaatctt
tacaggagtatattgtatgttttaaataattctaaatcaaaagaaacatttgcctatgaa
aaggatttttatggaaactatgggaaatttaacacaaataactttatagttgcatatcgt
aaagatgaaaaatgtccaaattgcggtaaaaaaatagaaaaaatcaaaataggaaatact
tcttcttatatatgcagtaactgtcaagttaaaaaataa
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